Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene54474 SustainPine v3.0 448
• AutoFact: R2R3-MYB transcription factor MYB8 [Picea glauca] 3.00018e-42
• FL-Next: tr=R2R3-MYB transcription factor MYB8; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 7.495e-32
N-terminus
sp_v3.0_unigene55430 SustainPine v3.0 414
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 4.0e-24
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 2.464e-28
C-terminus
sp_v3.0_unigene57434 SustainPine v3.0 413
• AutoFact: NAC domain containing protein 20 [Arabidopsis thaliana] dbj|BAD44041.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33081.1| NAC domain containing protein 20 [Arabidopsis thaliana] 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Putative N-terminus
sp_v3.0_unigene57846 SustainPine v3.0 162
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 4.0e-22
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 4.65e-40
Internal
sp_v3.0_unigene58067 SustainPine v3.0 316
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 8.0e-33
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
Putative C-terminus
sp_v3.0_unigene58285 SustainPine v3.0 412
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene58553 SustainPine v3.0 428
• AutoFact: COBRA-like protein 4 n=2 Tax=Arabidopsis RepID=COBL4_ARATH 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phytochelatin synthetase-like protein 2.975e-16
Internal
sp_v3.0_unigene59659 SustainPine v3.0 244
• AutoFact: cellulose synthase-like D2 [Physcomitrella patens] 2.0e-27
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene60466 SustainPine v3.0 260
• AutoFact: MYB domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ65_MALDO 2.0e-25
• FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 3.336e-19
Internal
sp_v3.0_unigene61648 SustainPine v3.0 253
• AutoFact: Myb domain protein 26 n=4 Tax=Arabidopsis RepID=Q9SPG3_ARATH 8.0e-12
• FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 1.29e-19
Internal
sp_v3.0_unigene62006 SustainPine v3.0 320
• AutoFact: Laccase-like multicopper oxidase 130 (Fragment) n=1 Tax=Ginkgo biloba RepID=Q693D1_GINBI 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 7.00649e-45
Internal
sp_v3.0_unigene63544 SustainPine v3.0 279
• AutoFact: R2R3-Myb4 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPT6_PINPS 5.0e-15
• FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Myb-related protein Hv33 2.115e-13
Internal
sp_v3.0_unigene64606 SustainPine v3.0 161
• AutoFact: Cellulose synthase [Medicago truncatula] 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 4.2039e-45
Internal
sp_v3.0_unigene64693 SustainPine v3.0 264
• AutoFact: cellulose synthase-like protein E1 [Arabidopsis thaliana] sp|Q8VZK9.1|CSLE1_ARATH RecName: Full=Cellulose synthase-like protein E1; Short=AtCslE1 gb|AAL36396.1| putative cellulose synthase catalytic subunit [Arabidopsis thaliana] dbj|BAE99166.1| putative 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 1.542e-17
Internal
sp_v3.0_unigene65612 SustainPine v3.0 201
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 2.0e-18
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene66994 SustainPine v3.0 389
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene67639 SustainPine v3.0 267
• AutoFact: cellulose synthase-like protein G1 [Arabidopsis thaliana] sp|Q570S7.1|CSLG1_ARATH RecName: Full=Cellulose synthase-like protein G1; Short=AtCslG1 dbj|BAD95063.1| putative protein [Arabidopsis thaliana] gb|AEE84839.1| cellulose synthase-like protein G1 [Ar 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 2.872e-28
Internal
sp_v3.0_unigene67870 SustainPine v3.0 306
• AutoFact: COBRA-like protein 4 n=2 Tax=Arabidopsis RepID=COBL4_ARATH 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein COBRA, putative 1.294e-17
N-terminus
sp_v3.0_unigene69758 SustainPine v3.0 245
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 9.0e-37
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 2.8026e-44
Internal
sp_v3.0_unigene70278 SustainPine v3.0 387
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain