Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37026 SustainPine v3.0 2191
AutoFact: Laccase 110a n=1 Tax=Populus trichocarpa RepID=B9HC76_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 0.0
Complete
sp_v3.0_unigene37318 SustainPine v3.0 769
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI4_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene37353 SustainPine v3.0 534
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TINY-like protein 6.434e-27
Putative C-terminus
sp_v3.0_unigene37672 SustainPine v3.0 997
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene37769 SustainPine v3.0 913
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene37770 SustainPine v3.0 1485
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene41380 SustainPine v3.0 125
AutoFact: Cellulose synthase-like D3-1, glycosyltransferase family 2 protein n=2 Tax=Selaginella moellendorffii RepID=D8R581_SELML 1.0e-16
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 3.79752e-43
Internal
sp_v3.0_unigene42716 SustainPine v3.0 571
AutoFact: cellulose synthase-like protein D4 [Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 1.96182e-44
Putative C-terminus
sp_v3.0_unigene46989 SustainPine v3.0 366
AutoFact: cellulose synthase-like protein D3 [Arabidopsis thaliana] sp|Q9M9M4.1|CSLD3_ARATH RecName: Full=Cellulose synthase-like protein D3; Short=AtCslD3; AltName: Full=Protein KOJAK gb|AAF26119.1|AC012328_22 putative cellulose synthase catalytic subunit [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 5.32493e-44
Internal
sp_v3.0_unigene47583 SustainPine v3.0 389
AutoFact: brittle stalk-2-like protein 3 [Zea mays] gb|ABL59983.1| brittle stalk-2-like protein 3 [Zea mays] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein COBRA, putative 2.853e-17
N-terminus
sp_v3.0_unigene51391 SustainPine v3.0 562
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 2.8026e-45
C-terminus
sp_v3.0_unigene51569 SustainPine v3.0 1172
AutoFact: Ch-cobra n=1 Tax=Cunninghamia lanceolata RepID=B7S746_CUNLA 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phytochelatin synthetase-like protein 9.957e-16
Internal
sp_v3.0_unigene51694 SustainPine v3.0 1336
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene51707 SustainPine v3.0 441
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 9.0e-24
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene51724 SustainPine v3.0 585
AutoFact: Cellulose synthase catalytic subunit n=2 Tax=Pinus RepID=Q5DI93_PINTA 3.0e-27
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene52552 SustainPine v3.0 100
AutoFact: MYB8 transcription factor n=4 Tax=Pinaceae RepID=D7GLD4_PINPS 4.0e-11
FL-Next: tr=R2R3-MYB transcription factor MYB8; Pinus taeda (Loblolly pine). 0.0
Sma3: R2r3-myb transcription factor, putative 3.076e-16
Internal
sp_v3.0_unigene53130 SustainPine v3.0 300
AutoFact: NAC domain containing protein 35 [Arabidopsis thaliana] gb|AAC78526.2| NAM (no apical meristem)-like protein [Arabidopsis thaliana] gb|AEC05582.1| NAC domain containing protein 35 [Arabidopsis thaliana] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene53354 SustainPine v3.0 411
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene54141 SustainPine v3.0 100
AutoFact: R2R3-MYB transcription factor n=1 Tax=Pinus taeda RepID=Q6V0J3_PINTA 2.0e-09
FL-Next: tr=R2R3-MYB transcription factor; Pinus taeda (Loblolly pine). 0.0
Sma3: MYB transcription factor 5.606e-10
Internal
sp_v3.0_unigene54470 SustainPine v3.0 173
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 2.0e-17
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 2.101e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain