Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25150 SustainPine v3.0 446
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene27695 SustainPine v3.0 881
• AutoFact: Dehydration-responsive element-binding protein 3 n=2 Tax=Arabidopsis RepID=DREB3_ARATH 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.578e-30
Putative Complete
sp_v3.0_unigene28206 SustainPine v3.0 974
• AutoFact: AP2 domain containing protein 5.0e-13
• FL-Next: sp=Ethylene-responsive transcription factor ERF039; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.612e-31
Complete
sp_v3.0_unigene28316 SustainPine v3.0 938
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene28534 SustainPine v3.0 616
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 7.00649e-45
C-terminus
sp_v3.0_unigene29208 SustainPine v3.0 403
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 9.99995e-41
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 1.4013e-45
C-terminus
sp_v3.0_unigene30163 SustainPine v3.0 960
• AutoFact: AP2 domain containing protein 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.206e-39
Complete
sp_v3.0_unigene30191 SustainPine v3.0 849
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9MU01_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene30671 SustainPine v3.0 1079
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L123_MALDO 2.0e-27
• FL-Next: sp=Dehydration-responsive element-binding protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 3.84e-30
Complete
sp_v3.0_unigene30713 SustainPine v3.0 875
• AutoFact: AP2 domain containing protein 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.163e-38
Putative Complete
sp_v3.0_unigene31054 SustainPine v3.0 522
• AutoFact: Myb-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z8U6_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 2.619e-24
N-terminus
sp_v3.0_unigene31840 SustainPine v3.0 591
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9GXD3_POPTR 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative N-terminus
sp_v3.0_unigene33151 SustainPine v3.0 1387
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene33417 SustainPine v3.0 363
• AutoFact: Cu-oxidase_2 domain containing protein 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Internal
sp_v3.0_unigene33470 SustainPine v3.0 951
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L123_MALDO 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.094e-31
C-terminus
sp_v3.0_unigene34930 SustainPine v3.0 1004
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene35684 SustainPine v3.0 1862
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene36444 SustainPine v3.0 755
• AutoFact: Dehydration-responsive element binding protein 6 n=1 Tax=Glycine max RepID=A5JNJ5_SOYBN 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.655e-39
Putative Complete
sp_v3.0_unigene36943 SustainPine v3.0 241
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI1_PINTA 2.0e-28
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 6.99248e-43
Internal
sp_v3.0_unigene37000 SustainPine v3.0 756
• AutoFact: MYB8 transcription factor n=4 Tax=Pinaceae RepID=D7GLD4_PINPS 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB8; Pinus taeda (Loblolly pine). 0.0
• Sma3: MYB transcription factor 1.641e-27
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain