Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene131095 SustainPine v3.0 419
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 7.00649e-45
C-terminus
sp_v3.0_unigene133702 SustainPine v3.0 216
AutoFact: NAC domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SZU8_RICCO 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene136252 SustainPine v3.0 238
AutoFact: Cellulose synthase n=2 Tax=rosids RepID=B9HA33_POPTR 9.0e-31
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene136326 SustainPine v3.0 295
AutoFact: Laccase, putative n=1 Tax=Ricinus communis RepID=B9S478_RICCO 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 4.06377e-44
Internal
sp_v3.0_unigene136734 SustainPine v3.0 240
AutoFact: COBRA-like protein 2 n=2 Tax=Arabidopsis RepID=COBL2_ARATH 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COBRA-like protein 4 2.866e-15
Internal
sp_v3.0_unigene138339 SustainPine v3.0 374
AutoFact: MYB transcription factor MYB92 [Glycine max] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 4.211e-11
Internal
sp_v3.0_unigene140410 SustainPine v3.0 617
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene141385 SustainPine v3.0 477
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 4.268e-37
C-terminus
sp_v3.0_unigene141952 SustainPine v3.0 507
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 9.80909e-45
Putative C-terminus
sp_v3.0_unigene143228 SustainPine v3.0 534
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Putative Complete
sp_v3.0_unigene143400 SustainPine v3.0 964
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COBRA-like protein 4 4.555e-15
C-terminus
sp_v3.0_unigene143858 SustainPine v3.0 501
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene148918 SustainPine v3.0 364
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 6.0e-36
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene149471 SustainPine v3.0 250
AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 2.0e-08
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 9.004e-40
Internal
sp_v3.0_unigene149770 SustainPine v3.0 416
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene149796 SustainPine v3.0 353
AutoFact: DREB-like protein n=2 Tax=Arachis hypogaea RepID=B4UW60_ARAHY 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene156571 SustainPine v3.0 345
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene160435 SustainPine v3.0 377
AutoFact: MYB transcription factor MYB64 (Fragment) n=1 Tax=Glycine max RepID=Q0PJD4_SOYBN 1.0e-20
FL-Next: tr=R2R3-MYB transcription factor MYB8; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 2.316e-24
Internal
sp_v3.0_unigene160630 SustainPine v3.0 371
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 1.54143e-44
C-terminus
sp_v3.0_unigene160662 SustainPine v3.0 122
AutoFact: R2R3-Myb4 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPT6_PINPS 3.0e-12
FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 7.625e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain