Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: positive regulation of transcription, DNA-dependent

Term: GO:0045893  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene224 SustainPine v3.0 2058
• AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene1668 SustainPine v3.0 1183
• AutoFact: plastid transcriptionally active 6 [Arabidopsis thaliana] ref|NP_001031076.1| plastid transcriptionally active 6 [Arabidopsis thaliana] gb|AAD41412.1|AC007727_1 EST gb|N95925 comes from this gene [Arabidopsis thaliana] gb|AAG40066.1|AF324715_1 At1g21600 [ 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene2243 SustainPine v3.0 1275
• AutoFact: plastid transcriptionally active 12 [Arabidopsis thaliana] gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene9813 SustainPine v3.0 1168
• AutoFact: B3 domain-containing transcription factor FUS3 n=2 Tax=Arabidopsis RepID=FUS3_ARATH 2.0e-35
• FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: VP1/ABI3-like protein 1.869e-08
Putative C-terminus
sp_v3.0_unigene16106 SustainPine v3.0 895
• AutoFact: pfam02362, B3, B3 DNA binding domain 3.0e-19
• FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
• Sma3: ABI3-like factor 2.56e-14
Putative C-terminus
sp_v3.0_unigene23525 SustainPine v3.0 856
• AutoFact: plastid transcriptionally active 12 [Arabidopsis thaliana] gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene38893 SustainPine v3.0 1057
• AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene70097 SustainPine v3.0 441
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104120 SustainPine v3.0 331
• AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104719 SustainPine v3.0 568
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 5.0e-39
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain