Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: xylem and phloem pattern formation

Term: GO:0010051  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene95111 SustainPine v3.0 586
• AutoFact: Auxin:hydrogen symporter/transporter n=1 Tax=Zinnia violacea RepID=C0SU67_ZINEL 5.99756e-43
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 1.27518e-43
C-terminus
sp_v3.0_unigene95183 SustainPine v3.0 3591
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RVD2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.216e-11
Complete
sp_v3.0_unigene96886 SustainPine v3.0 393
• AutoFact: Dynamin central region; Dynamin [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dynamin, putative 1.911e-24
Internal
sp_v3.0_unigene97054 SustainPine v3.0 640
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Progesterone 5-beta-reductase 6.372e-07
N-terminus
sp_v3.0_unigene97275 SustainPine v3.0 643
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 5.389e-12
N-terminus
sp_v3.0_unigene97954 SustainPine v3.0 426
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 8.705e-12
N-terminus
sp_v3.0_unigene98781 SustainPine v3.0 716
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 2.547e-09
Internal
sp_v3.0_unigene100339 SustainPine v3.0 442
• AutoFact: Class III homeodomain-leucine zipper protein C3HDZ2 (Fragment) n=1 Tax=Psilotum nudum RepID=Q20BL3_PSINU 2.0e-39
• FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper 2.226e-30
Internal
sp_v3.0_unigene101156 SustainPine v3.0 887
• AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.881e-33
Internal
sp_v3.0_unigene101364 SustainPine v3.0 812
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 5.389e-12
Putative N-terminus
sp_v3.0_unigene101811 SustainPine v3.0 1251
• AutoFact: Progesterone 5-beta-reductase n=1 Tax=Hoya carnosa RepID=D6N9W9_HOYCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative progesterone 5-beta-reductase 2.884e-12
C-terminus
sp_v3.0_unigene102645 SustainPine v3.0 414
• AutoFact: PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB 2.0e-35
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 3.748e-29
Internal
sp_v3.0_unigene103274 SustainPine v3.0 588
• AutoFact: ADP-ribosylation factor GTPase-activating protein AGD3 n=2 Tax=Arabidopsis RepID=AGD3_ARATH 9.0e-13
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene104486 SustainPine v3.0 381
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 7.615e-12
Internal
sp_v3.0_unigene106095 SustainPine v3.0 755
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.302e-09
Internal
sp_v3.0_unigene106963 SustainPine v3.0 226
• AutoFact: Unassigned protein
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 1.593e-07
Internal
sp_v3.0_unigene109108 SustainPine v3.0 701
• AutoFact: Unassigned protein
• FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
• Sma3: WD-repeat protein, putative 6.708e-12
Internal
sp_v3.0_unigene114110 SustainPine v3.0 726
• AutoFact: myb-like DNA-binding domain, SHAQKYF class family protein [Oryza sativa Japonica Group] 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Myb family transcription factor-related protein 9.122e-16
N-terminus
sp_v3.0_unigene115778 SustainPine v3.0 534
• AutoFact: Topless-related 2 protein [Arabidopsis thaliana] sp|Q9LRZ0.2|TPR2_ARATH RecName: Full=Topless-related protein 2 gb|AEE75871.1| Topless-related 2 protein [Arabidopsis thaliana] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 8.705e-12
N-terminus
sp_v3.0_unigene117214 SustainPine v3.0 432
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 5.954e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain