Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vegetative to reproductive phase transition of meristem

Term: GO:0010228  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene183774 SustainPine v3.0 470
AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene184249 SustainPine v3.0 301
AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P 1.0e-35
FL-Next: Isoform 2 of Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana GN=CAND1 0.0
Internal
sp_v3.0_unigene184636 SustainPine v3.0 546
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 7.00649e-45
C-terminus
sp_v3.0_unigene185343 SustainPine v3.0 455
AutoFact: Ascorbate oxidase-like protein (Fragment) n=6 Tax=Picea RepID=E5FY33_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: L-ascorbate oxidase 5.314e-27
Internal
sp_v3.0_unigene189926 SustainPine v3.0 177
AutoFact: Gly_rich multi-domain protein 1.0e-09
unknown
sp_v3.0_unigene190190 SustainPine v3.0 397
AutoFact: GRP multi-domain protein 2.0e-11
Sma3: Putative glycine rich protein 6.261e-22
coding
sp_v3.0_unigene190483 SustainPine v3.0 473
AutoFact: Cold shock protein n=1 Tax=Bermanella marisrubri RepID=Q1N1Z0_9GAMM 7.0e-18
FL-Next: tr=Cold shock domain containing proteins, putative; Ricinus communis (Castor bean). 0.0
Sma3: Glycine-rich protein 2b 2.893e-08
Complete
sp_v3.0_unigene194378 SustainPine v3.0 439
AutoFact: BEL1-related homeotic protein 30 [Solanum tuberosum] 2.0e-40
FL-Next: sp=BEL1-like homeodomain protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bel1 homeotic protein, putative 7.773e-28
Internal
sp_v3.0_unigene196306 SustainPine v3.0 490
AutoFact: Laccase, putative n=1 Tax=Ricinus communis RepID=B9T6M5_RICCO 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 1.82169e-44
C-terminus
sp_v3.0_unigene204625 SustainPine v3.0 411
AutoFact: glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] 3.0e-22
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Complete
sp_v3.0_unigene204834 SustainPine v3.0 272
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene205666 SustainPine v3.0 431
AutoFact: GRP multi-domain protein 3.0e-14
Sma3: Putative glycine rich protein 1.101e-24
coding
sp_v3.0_unigene207847 SustainPine v3.0 454
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 0.0
Putative C-terminus
sp_v3.0_unigene208468 SustainPine v3.0 627
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.99967e-42
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene210220 SustainPine v3.0 838
AutoFact: CLP-like protein 3 [Arabidopsis thaliana] ref|NP_974220.1| CLP-like protein 3 [Arabidopsis thaliana] gb|AAF04897.1|AC011437_12 unknown protein [Arabidopsis thaliana] gb|AAL32944.1| Unknown protein [Arabidopsis thaliana] gb|AAM91151.1| unknown protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene210446 SustainPine v3.0 493
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain