Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cold acclimation

Term: GO:0009631  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene166744 SustainPine v3.0 225
AutoFact: Transcription factor MYB32 n=2 Tax=Arabidopsis RepID=MYB32_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 2.695e-30
N-terminus
sp_v3.0_unigene167715 SustainPine v3.0 256
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 3.106e-27
N-terminus
sp_v3.0_unigene185047 SustainPine v3.0 401
AutoFact: MYB1 protein n=1 Tax=Gerbera hybrid cultivar RepID=Q70RD3_GERHY 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R2r3-myb transcription factor, putative 2.172e-15
N-terminus
sp_v3.0_unigene194238 SustainPine v3.0 200
AutoFact: Transcription repressor MYB4 n=6 Tax=Brassicaceae RepID=MYB4_ARATH 2.0e-28
FL-Next: tr=R2R3-MYB transcription factor MYB10; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 3.51e-15
Putative N-terminus
sp_v3.0_unigene197115 SustainPine v3.0 321
AutoFact: MYB transcription factor MYB92 [Glycine max] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.455e-11
Putative N-terminus
sp_v3.0_unigene201987 SustainPine v3.0 669
AutoFact: Myb transcription factor n=1 Tax=Solenostemon scutellarioides RepID=A5A381_SOLSC 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R2r3-myb transcription factor, putative 1.07e-15
N-terminus
sp_v3.0_unigene203277 SustainPine v3.0 427
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 6.513e-15
N-terminus
sp_v3.0_unigene203281 SustainPine v3.0 232
AutoFact: R2R3-MYB transcription factor MYB14 n=1 Tax=Pinus taeda RepID=Q27IP2_PINTA 7.0e-36
FL-Next: tr=R2R3-MYB transcription factor MYB14; Pinus taeda (Loblolly pine). 0.0
Sma3: MYB transcription factor 3.744e-10
Internal
sp_v3.0_unigene207952 SustainPine v3.0 324
AutoFact: Myb transcription factor n=1 Tax=Solenostemon scutellarioides RepID=A5A381_SOLSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Myb protein 2.916e-09
Putative N-terminus
sp_v3.0_unigene208468 SustainPine v3.0 627
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.99967e-42
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene208960 SustainPine v3.0 763
AutoFact: cold-related protein Cor413 [Gossypium barbadense] gb|ABI97481.1| COR413-like protein [Gossypium barbadense] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cold acclimation protein WCOR413-like protein 4.994e-17
Putative Complete
sp_v3.0_unigene209831 SustainPine v3.0 318
AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT3g26420/F20C19_14 1.945e-09
N-terminus
sp_v3.0_unigene210066 SustainPine v3.0 494
AutoFact: Ca2+/H+-exchanging protein n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A4GWV0_HORVD 6.0e-30
FL-Next: Isoform 2 of Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a 0.0
Sma3: Ca2+ antiporter/cation exchanger 8.07e-21
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain