Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cold acclimation

Term: GO:0009631  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene93632 SustainPine v3.0 1151
• AutoFact: transcription factor DcMYB5 [Daucus carota] 0.0
• FL-Next: sp=Transcription factor MYB3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: MYB transcription factor 4.346e-15
Complete
sp_v3.0_unigene95458 SustainPine v3.0 1036
• AutoFact: R2R3-MYB transcription factor MYB22 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTE2_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 6.925e-30
Putative Complete
sp_v3.0_unigene95852 SustainPine v3.0 929
• AutoFact: MYB-like transcriptional factor MBF1 n=1 Tax=Picea mariana RepID=Q40920_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 2.199e-13
C-terminus
sp_v3.0_unigene99441 SustainPine v3.0 903
• AutoFact: CAX n=1 Tax=Suaeda salsa RepID=Q6R2R4_SUASA 0.0
• FL-Next: sp=Vacuolar cation/proton exchanger 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ca2+ antiporter/cation exchanger 9.831e-21
Putative N-terminus
sp_v3.0_unigene105005 SustainPine v3.0 344
• AutoFact: MYB-like transcriptional factor MBF1 n=1 Tax=Picea mariana RepID=Q40920_PICMA 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: R2r3-myb transcription factor, putative 5.016e-22
N-terminus
sp_v3.0_unigene112868 SustainPine v3.0 699
• AutoFact: typical P-type R2R3 Myb protein [Sorghum bicolor] 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB1; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 1.221e-35
N-terminus
sp_v3.0_unigene127304 SustainPine v3.0 1619
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene128574 SustainPine v3.0 920
• AutoFact: R2R3-Myb5 transcription factor (Fragment) n=2 Tax=Pinus RepID=B1PPT8_PINPS 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 6.913e-21
C-terminus
sp_v3.0_unigene129381 SustainPine v3.0 642
• AutoFact: R2R3-MYB transcription factor MYB22 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTE2_PINTA 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 5.347e-09
C-terminus
sp_v3.0_unigene129979 SustainPine v3.0 356
• AutoFact: R2R3 Myb4a C2 repressor motif protein n=1 Tax=Vitis vinifera RepID=A1E8L7_VITVI 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB10; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 1.781e-24
Internal
sp_v3.0_unigene131550 SustainPine v3.0 520
• AutoFact: Odorant 1 protein n=1 Tax=Zea mays RepID=B6TI05_MAIZE 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB1; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 6.311e-38
Internal
sp_v3.0_unigene133313 SustainPine v3.0 296
• AutoFact: MAPKK n=2 Tax=Solanoideae RepID=Q66MH6_SOLLC 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MAP kinase kinase 3.178e-18
Internal
sp_v3.0_unigene137734 SustainPine v3.0 165
• AutoFact: myb-like transcription factor 1 [Gossypium hirsutum] 3.0e-24
• FL-Next: tr=R2R3-MYB transcription factor MYB13; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 2.15e-28
Internal
sp_v3.0_unigene147216 SustainPine v3.0 696
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 7.00005e-41
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene149002 SustainPine v3.0 353
• AutoFact: MYB-like transcriptional factor MBF1 n=1 Tax=Picea mariana RepID=Q40920_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 4.71e-13
N-terminus
sp_v3.0_unigene149754 SustainPine v3.0 377
• AutoFact: R2R3-Myb5 transcription factor (Fragment) n=2 Tax=Pinus RepID=B1PPT8_PINPS 1.0e-31
• FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 3.724e-08
Internal
sp_v3.0_unigene159102 SustainPine v3.0 265
• AutoFact: glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40] ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus flavus NRRL3357] dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40] gb|EED53406.1| heterogen 1.0e-21
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 7.776e-30
N-terminus
sp_v3.0_unigene164328 SustainPine v3.0 405
• AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 1.13e-16
N-terminus
sp_v3.0_unigene164692 SustainPine v3.0 133
• AutoFact: transcription factor MYB4 [Brassica rapa var. purpuraria] 7.0e-16
• FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: R2r3-myb transcription factor, putative 1.395e-15
N-terminus
sp_v3.0_unigene164829 SustainPine v3.0 125
• AutoFact: R2R3-MYB transcription factor MYB20 (Fragment) n=1 Tax=Picea glauca RepID=C0JTD4_PICGL 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: R2r3-myb transcription factor, putative 4.008e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain