Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: cold acclimation

Term: GO:0009631  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18326 SustainPine v3.0 2630
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene20450 SustainPine v3.0 668
• AutoFact: transcription factor DcMYB3-1 [Daucus carota] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 7.006e-15
N-terminus
sp_v3.0_unigene21606 SustainPine v3.0 533
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.0e-29
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative N-terminus
sp_v3.0_unigene23349 SustainPine v3.0 760
• AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB1 1.096e-10
N-terminus
sp_v3.0_unigene24226 SustainPine v3.0 652
• AutoFact: MYB transcription factor n=3 Tax=Oryza sativa RepID=Q0D3F9_ORYSJ 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 1.535e-30
N-terminus
sp_v3.0_unigene24367 SustainPine v3.0 700
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen-activated protein kinase kinase 2.918e-16
C-terminus
sp_v3.0_unigene24821 SustainPine v3.0 467
• AutoFact: MYB transcription factor MYB185 [Glycine max] 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 7.067e-15
N-terminus
sp_v3.0_unigene25442 SustainPine v3.0 841
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.99993e-41
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene25567 SustainPine v3.0 326
• AutoFact: MYB transcription factor n=1 Tax=Eucalyptus gunnii RepID=Q70KC4_EUCGU 1.0e-27
• FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: R2r3-myb transcription factor, putative 5.281e-18
N-terminus
sp_v3.0_unigene27767 SustainPine v3.0 597
• AutoFact: R2R3-MYB transcription factor MYB5 n=1 Tax=Picea glauca RepID=A5JYE9_PICGL 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 1.195e-29
N-terminus
sp_v3.0_unigene28661 SustainPine v3.0 2068
• AutoFact: Myb transcription factor [Vitis vinifera] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 2.167e-25
Putative Complete
sp_v3.0_unigene31054 SustainPine v3.0 522
• AutoFact: Myb-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z8U6_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 2.619e-24
N-terminus
sp_v3.0_unigene31307 SustainPine v3.0 443
• AutoFact: R2R3-MYB transcription factor MYB14 n=1 Tax=Pinus taeda RepID=Q27IP2_PINTA 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB14; Pinus taeda (Loblolly pine). 0.0
• Sma3: MYB transcription factor 4.668e-15
N-terminus
sp_v3.0_unigene31523 SustainPine v3.0 588
• AutoFact: MYB transcription factor MYB185 [Glycine max] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB1 9.757e-11
N-terminus
sp_v3.0_unigene32943 SustainPine v3.0 839
• AutoFact: Glycine-rich RNA-binding protein n=1 Tax=Sequoia sempervirens RepID=E5FXB3_SEQSE 9.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene33248 SustainPine v3.0 1605
• AutoFact: R2R3-MYB transcription factor MYB5 n=1 Tax=Picea glauca RepID=A5JYE9_PICGL 0.0
• FL-Next: sp=Myb-related protein 308; Antirrhinum majus (Garden snapdragon). 0.0
• Sma3: MYB transcription factor 3.82e-28
Complete
sp_v3.0_unigene33318 SustainPine v3.0 481
• AutoFact: Myb transcription factor [Solenostemon scutellarioides] gb|ABP57086.1| Myb transcription factor [Solenostemon scutellarioides] 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 2.579e-13
N-terminus
sp_v3.0_unigene34499 SustainPine v3.0 749
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene34989 SustainPine v3.0 784
• AutoFact: Ca2+ antiporter/cation exchanger (Fragment) n=2 Tax=Populus trichocarpa RepID=B9GII2_POPTR 0.0
• FL-Next: sp=Vacuolar cation/proton exchanger 1a; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Ca2+ antiporter/cation exchanger 1.026e-20
Internal
sp_v3.0_unigene35445 SustainPine v3.0 616
• AutoFact: Myb transcription factor n=1 Tax=Solenostemon scutellarioides RepID=A5A381_SOLSC 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: R2r3-myb transcription factor, putative 1.07e-15
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain