Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18844 SustainPine v3.0 845
AutoFact: Lipoxygenase n=1 Tax=Camellia sinensis RepID=A8W7J7_CAMSI 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene18965 SustainPine v3.0 581
AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Pleurotus ostreatus RepID=Q96TV2_PLEOS 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene19153 SustainPine v3.0 1854
AutoFact: Lipoxygenase n=2 Tax=Populus trichocarpa RepID=B9HJW6_POPTR 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene19155 SustainPine v3.0 1127
AutoFact: glyceraldehyde-3-phosphate dehydrogenase B subunit [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyceraldehyde-3-phosphate dehydrogenase 2.8026e-45
C-terminus
sp_v3.0_unigene19567 SustainPine v3.0 620
AutoFact: Tryp_alpha_amyl domain containing protein 4.0e-08
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Sma3: 36.4 kDa proline-rich protein 1.45e-13
Complete
sp_v3.0_unigene20066 SustainPine v3.0 341
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-23
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: Putative 9-cis-epoxycarotenoid dioxygenase 1.98e-16
C-terminus
sp_v3.0_unigene20580 SustainPine v3.0 1511
AutoFact: organic cation/carnitine transporter4 [Arabidopsis thaliana] dbj|BAB02242.1| organic anion transporter-like protein [Arabidopsis thaliana] gb|AAR23714.1| At3g20660 [Arabidopsis thaliana] dbj|BAD44187.1| hypothetical protein [Arabidopsis thaliana] gb|AEE76 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene21006 SustainPine v3.0 886
AutoFact: Major facilitator superfamily n=1 Tax=Medicago truncatula RepID=A2Q643_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene21114 SustainPine v3.0 1038
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RLP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 2.677e-16
Putative Complete
sp_v3.0_unigene21167 SustainPine v3.0 1038
AutoFact: NADPH-protochlorophyllide-oxidoreductase n=6 Tax=Pinaceae RepID=Q41202_PINMU 0.0
FL-Next: tr=NADPH-protochlorophyllide-oxidoreductase; Pinus mugo (Dwarf mountain pine). 0.0
Sma3: NADPH-protochlorophyllide oxidoreductase 5.682e-23
C-terminus
sp_v3.0_unigene21358 SustainPine v3.0 1073
AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; crystallinum). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene21382 SustainPine v3.0 983
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.593e-32
Complete
sp_v3.0_unigene21484 SustainPine v3.0 579
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene21573 SustainPine v3.0 1325
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.201e-28
Complete
sp_v3.0_unigene22308 SustainPine v3.0 465
AutoFact: RecName: Full=Adenylate kinase, chloroplastic; Short=AK; AltName: Full=ATP-AMP transphosphorylase pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a) pdb|1ZAK|B Chain B, Adenylate Kin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylate kinase 7.161e-16
N-terminus
sp_v3.0_unigene22557 SustainPine v3.0 803
AutoFact: Protein plastid transcriptionally active 16 n=3 Tax=Arabidopsis RepID=Q9STF2_ARATH 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22613 SustainPine v3.0 690
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic n=3 Tax=Papilionoideae RepID=G3PB_PEA 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic 3.076e-12
N-terminus
sp_v3.0_unigene22614 SustainPine v3.0 881
AutoFact: GRP multi-domain protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene22795 SustainPine v3.0 1609
AutoFact: uridylyltransferase-related protein [Arabidopsis thaliana] gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana] gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana] gb|AAP13425.1| At1g16880 [Arabidopsis thaliana] gb|AEE29513.1| urid 0.0
FL-Next: sp=Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Amino acid binding protein, putative 1.87e-07
Complete
sp_v3.0_unigene22852 SustainPine v3.0 1041
AutoFact: secE/sec61-gamma protein transport protein [Arabidopsis thaliana] emb|CAB10266.1| hypothetical protein [Arabidopsis thaliana] emb|CAB78529.1| hypothetical protein [Arabidopsis thaliana] gb|AAK76501.1| unknown protein [Arabidopsis thaliana] gb|AAM20124.1| 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain