Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene14818 SustainPine v3.0 1598
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 3.005e-40
N-terminus
sp_v3.0_unigene15086 SustainPine v3.0 1231
• AutoFact: Copper P1B-ATPase n=2 Tax=Glycine max RepID=A7ISW5_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 2.026e-11
C-terminus
sp_v3.0_unigene15351 SustainPine v3.0 369
• AutoFact: Copper-transporting atpase paa1, putative n=1 Tax=Ricinus communis RepID=B9RQX4_RICCO 3.0e-35
• FL-Next: sp=Copper-transporting ATPase PAA2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: P-ATPase family transporter: copper ion 1.143e-07
Internal
sp_v3.0_unigene16479 SustainPine v3.0 564
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-32
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 7.4e-26
C-terminus
sp_v3.0_unigene16680 SustainPine v3.0 598
• AutoFact: Cell division protease ftsH, putative n=1 Tax=Ricinus communis RepID=B9SIY9_RICCO 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Membrane AAA-metalloprotease 5.882e-09
Internal
sp_v3.0_unigene16722 SustainPine v3.0 731
• AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-25
• FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: 36.4 kDa proline-rich protein 1.494e-17
Complete
sp_v3.0_unigene16801 SustainPine v3.0 903
• AutoFact: PAP_fibrillin domain containing protein 2.0e-06
• FL-Next: Isoform 3 of Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 0.0
N-terminus
sp_v3.0_unigene16993 SustainPine v3.0 994
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene17020 SustainPine v3.0 1089
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene17226 SustainPine v3.0 1181
• AutoFact: FLU, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17393 SustainPine v3.0 2774
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Serine endopeptidase degp2, putative 3.948e-19
Complete
sp_v3.0_unigene17592 SustainPine v3.0 1048
• AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Complete
sp_v3.0_unigene17902 SustainPine v3.0 1514
• AutoFact: Putative translocon-associated protein alpha subunit n=1 Tax=Jatropha curcas RepID=C9E1T6_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17976 SustainPine v3.0 1361
• AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene18160 SustainPine v3.0 754
• AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene18205 SustainPine v3.0 1342
• AutoFact: photosystem I reaction center subunit III [Vigna radiata] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PSI-F 4.34403e-43
Complete
sp_v3.0_unigene18308 SustainPine v3.0 817
• AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PSI-E 2.123e-27
Complete
sp_v3.0_unigene18326 SustainPine v3.0 2630
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene18637 SustainPine v3.0 693
• AutoFact: PAP fibrillin [Medicago truncatula] 3.00004e-41
• FL-Next: sp=Probable plastid-lipid-associated protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene18678 SustainPine v3.0 989
• AutoFact: Lipoxygenase n=2 Tax=Populus trichocarpa RepID=B9HJW6_POPTR 0.0
• FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
• Sma3: Lipoxygenase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain