Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene207367 SustainPine v3.0 433
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T135_RICCO 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 36.4 kDa proline-rich protein 2.564e-10
C-terminus
sp_v3.0_unigene207691 SustainPine v3.0 1118
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene207712 SustainPine v3.0 784
AutoFact: component of 6.1 kDa polypeptide of photosystem II reaction center [Brassica rapa] 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II reaction center W protein, chloroplastic 9.483e-13
Complete
sp_v3.0_unigene207815 SustainPine v3.0 492
AutoFact: Light-harvesting complex n=1 Tax=Selaginella moellendorffii RepID=D8SUF1_SELML 8.00001e-42
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 8.341e-22
C-terminus
sp_v3.0_unigene207985 SustainPine v3.0 286
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 2.00386e-43
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 8.322e-29
Putative C-terminus
sp_v3.0_unigene208286 SustainPine v3.0 285
AutoFact: Chloroplast thylakoid-bound ascorbate peroxidase n=2 Tax=Vigna unguiculata RepID=Q5QHW7_VIGUN 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thylakoid-bound ascorbate peroxidase 9.515e-23
C-terminus
sp_v3.0_unigene208394 SustainPine v3.0 380
AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PSI-E 1.083e-23
Complete
sp_v3.0_unigene208463 SustainPine v3.0 754
AutoFact: NADPH-protochlorophyllide-oxidoreductase n=6 Tax=Pinaceae RepID=Q41202_PINMU 0.0
FL-Next: tr=NADPH-protochlorophyllide-oxidoreductase; Pinus mugo (Dwarf mountain pine). 0.0
Sma3: NADPH-protochlorophyllide oxidoreductase 5.047e-23
C-terminus
sp_v3.0_unigene208473 SustainPine v3.0 669
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene208497 SustainPine v3.0 382
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene208531 SustainPine v3.0 602
AutoFact: Photosystem I reaction center subunit psaK, chloroplastic n=3 Tax=BEP clade RepID=PSAK_HORVU 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem I subunit X 3.742e-14
Complete
sp_v3.0_unigene209019 SustainPine v3.0 366
AutoFact: Lipoxygenase n=1 Tax=Corylus avellana RepID=Q93YI8_CORAV 9.80909e-45
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene209201 SustainPine v3.0 631
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 3.00018e-42
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene209229 SustainPine v3.0 263
AutoFact: Light-harvesting chlorophyll a/b binding protein of photosystem II n=1 Tax=Ginkgo biloba RepID=Q39768_GINBI 1.0e-39
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 3.374e-29
Putative C-terminus
sp_v3.0_unigene209304 SustainPine v3.0 369
AutoFact: PREDICTED: similar to ferritin n=2 Tax=Hydra magnipapillata RepID=UPI0001926350 2.0e-28
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene209309 SustainPine v3.0 433
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wound/stress protein 2.315e-13
C-terminus
sp_v3.0_unigene209550 SustainPine v3.0 497
AutoFact: Tryp_alpha_amyl domain containing protein 1.0e-09
Sma3: 36.4 kDa proline-rich protein 9.334e-14
putative_coding
sp_v3.0_unigene209721 SustainPine v3.0 522
AutoFact: Photosystem I reaction center subunit n=1 Tax=Nicotiana tabacum RepID=D2K7Z2_TOBAC 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem I reaction center subunit N, chloroplastic 2.971e-17
C-terminus
sp_v3.0_unigene209731 SustainPine v3.0 687
AutoFact: Photosystem II reaction center W protein, chloroplastic n=1 Tax=Spinacia oleracea RepID=PSBW_SPIOL 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II reaction center W protein, chloroplastic 7.999e-13
Putative Complete
sp_v3.0_unigene209778 SustainPine v3.0 260
AutoFact: cytochrome b5 DIF-F [Petunia x hybrida] gb|AAR89457.1| cytochrome B5 [Petunia x hybrida] gb|ABC74800.1| cytochrome B5 [Petunia x hybrida] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome b5 5.269e-31
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain