Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154820 SustainPine v3.0 137
• AutoFact: Glutathione peroxidase n=1 Tax=Nelumbo nucifera RepID=A3FPF8_NELNU 2.0e-13
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene155014 SustainPine v3.0 414
• AutoFact: Glyceraldehyde-3-phosphate dehydrogenase, type I n=7 Tax=Pseudomonas RepID=Q4K7S6_PSEF5 0.0
• FL-Next: tr=Glyceraldehyde-phosphate dehydrogenase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic 6.714e-24
Internal
sp_v3.0_unigene155229 SustainPine v3.0 507
• AutoFact: Cyclophilin, putative n=4 Tax=Plasmodium RepID=A5K4H5_PLAVS 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene155379 SustainPine v3.0 357
• AutoFact: Proteasome 26S ATPase subunit 3 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C9M7_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 1.654e-13
Internal
sp_v3.0_unigene155455 SustainPine v3.0 466
• AutoFact: Glutathione peroxidase n=1 Tax=Chlamydomonas sp. W80 RepID=Q9SXL6_CHLSW 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene155529 SustainPine v3.0 276
• AutoFact: Light-harvesting chlorophyll-a/b protein of photosystem I n=3 Tax=Chlamydomonadales RepID=Q75VY8_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Light-harvesting chlorophyll-a/b protein of photosystem I 3.272e-14
Internal
sp_v3.0_unigene155581 SustainPine v3.0 453
• AutoFact: Chloroplast light-harvesting complex I protein Lhca9 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ7_ACEAT 5.0e-39
• FL-Next: tr=Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I; Pinus sylvestris (Scots pine). 0.0
• Sma3: Chloroplast light-harvesting complex I protein Lhca9 9.259e-13
Internal
sp_v3.0_unigene155593 SustainPine v3.0 317
• AutoFact: Glutathione peroxidase n=1 Tax=Paramecium tetraurelia RepID=A0CYK6_PARTE 7.0e-24
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene155667 SustainPine v3.0 558
• AutoFact: 50S ribosomal protein L1 n=34 Tax=Pseudomonas RepID=RL1_PSE14 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.26e-38
Internal
sp_v3.0_unigene155820 SustainPine v3.0 395
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cochliobolus lunatus RepID=Q1EHH1_CURLU 2.8026e-45
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene155901 SustainPine v3.0 567
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Micromonas RepID=C1FFK0_MICSR 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene155950 SustainPine v3.0 393
• AutoFact: Glutathione peroxidase n=4 Tax=Bacillus RepID=C3AX75_BACMY 1.0e-36
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene155975 SustainPine v3.0 281
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Chlamydomonadales RepID=A8IVQ7_CHLRE 4.0e-36
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene156468 SustainPine v3.0 433
• AutoFact: RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S proteasome AAA-ATPase subunit RPT1; AltName: Full=26S proteasome subunit 7; AltName: Full=Regulatory particle triple-A ATPase subunit 1 dbj|BAA13021.1| 26S proteasome ATPase subunit [Spina 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 1.789e-13
Internal
sp_v3.0_unigene156489 SustainPine v3.0 461
• AutoFact: Chaperone protein DnaJ n=1 Tax=Bermanella marisrubri RepID=Q1N388_9GAMM 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156491 SustainPine v3.0 263
• AutoFact: Ferritin n=1 Tax=Crassostrea gigas RepID=Q7YZR8_CRAGI 1.0e-27
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene156531 SustainPine v3.0 280
• AutoFact: Ferritin n=1 Tax=Crassostrea gigas RepID=Q7YZR8_CRAGI 1.0e-21
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene156560 SustainPine v3.0 414
• AutoFact: Chlorophyll a-b binding protein type 1 member F3, chloroplastic n=2 Tax=Polypodiales RepID=CB23_POLMU 0.0
• FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: LHCP 3.607e-29
Putative C-terminus
sp_v3.0_unigene156598 SustainPine v3.0 358
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Oikopleura dioica RepID=E4YT26_OIKDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene156730 SustainPine v3.0 381
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=3 Tax=Theileria parva RepID=Q4N970_THEPA 2.0e-37
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain