Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5777 SustainPine v3.0 1442
AutoFact: embryo sac development arrest 3 protein [Arabidopsis thaliana] ref|NP_001078004.1| embryo sac development arrest 3 protein [Arabidopsis thaliana] gb|AAC12826.1| unknown protein [Arabidopsis thaliana] gb|AAM20515.1| unknown protein [Arabidopsis thaliana] g 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5802 SustainPine v3.0 1134
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SEE4_RICCO 0.0
FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
Sma3: Lil3 protein 2.748e-17
Complete
sp_v3.0_unigene5855 SustainPine v3.0 1305
AutoFact: heme-binding-like protein [Arabidopsis thaliana] sp|Q9SR77.1|HBPL1_ARATH RecName: Full=Heme-binding-like protein At3g10130, chloroplastic; Flags: Precursor gb|AAF04411.1|AC010927_4 unknown protein [Arabidopsis thaliana] gb|AAW38980.1| At3g10130 [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5949 SustainPine v3.0 1537
AutoFact: protein disulfide isomerase [Arabidopsis thaliana] gb|AAL24407.1| Unknown protein [Arabidopsis thaliana] gb|AAM10168.1| unknown protein [Arabidopsis thaliana] gb|ABY91282.1| snowy cotyledon 2 [Arabidopsis thaliana] gb|AEE76210.1| protein disulfide isomera 2.0e-37
FL-Next: sp=Protein disulfide-isomerase SCO2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Snowy cotyledon 2 9.26e-06
Complete
sp_v3.0_unigene6064 SustainPine v3.0 1216
AutoFact: PGR5-like protein 1A [Arabidopsis thaliana] gb|AEE84677.1| PGR5-like protein 1A [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene6309 SustainPine v3.0 1586
AutoFact: RecName: Full=ATP synthase delta chain, chloroplastic; AltName: Full=F-ATPase delta chain; Flags: Precursor gb|AAA33647.1| ATP synthase delta subunit [Pisum sativum] 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP synthase 5.571e-18
Complete
sp_v3.0_unigene6341 SustainPine v3.0 1682
AutoFact: Transketolase, putative n=1 Tax=Ricinus communis RepID=B9T0B2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transketolase 0.0
Internal
sp_v3.0_unigene6355 SustainPine v3.0 2803
AutoFact: Lipoxygenase (Fragment) n=5 Tax=Vitis vinifera RepID=D7U236_VITVI 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Putative Complete
sp_v3.0_unigene6370 SustainPine v3.0 2418
AutoFact: protease Do-like 2 [Arabidopsis thaliana] sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana] gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine endopeptidase degp2, putative 2.995e-19
Complete
sp_v3.0_unigene6608 SustainPine v3.0 2999
AutoFact: Lipoxygenase n=1 Tax=Ricinus communis RepID=B9RSQ2_RICCO 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Complete
sp_v3.0_unigene6665 SustainPine v3.0 1407
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ricinus communis RepID=B9T6J3_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene7075 SustainPine v3.0 1370
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene7123 SustainPine v3.0 2183
AutoFact: PREDICTED: similar to SPPA (signal peptide peptidase); protease IV/ serine-type endopeptidase n=1 Tax=Vitis vinifera RepID=UPI000198502A 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative protease IV 1.902e-09
C-terminus
sp_v3.0_unigene7199 SustainPine v3.0 794
AutoFact: SOUL heme-binding protein [Arabidopsis thaliana] gb|AAL38336.1| unknown protein [Arabidopsis thaliana] gb|AAN15391.1| unknown protein [Arabidopsis thaliana] gb|AED92799.1| SOUL heme-binding protein [Arabidopsis thaliana] 8.00001e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene7387 SustainPine v3.0 1552
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Complete
sp_v3.0_unigene7420 SustainPine v3.0 1933
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 6.982e-16
Complete
sp_v3.0_unigene7515 SustainPine v3.0 1424
AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 3.381e-17
C-terminus
sp_v3.0_unigene7534 SustainPine v3.0 2593
AutoFact: DnaJ domain-containing protein n=2 Tax=Arabidopsis RepID=Q9SR96_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7561 SustainPine v3.0 1924
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=C0PT31_PICSI 0.0
FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene8089 SustainPine v3.0 883
AutoFact: NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana] gb|AAK93594.1| unknown protein [Arabidopsis thaliana] gb|AAM45014.1| unknown protein [Arabidopsis thaliana] gb|AAM63083.1| unknown [Arabidopsis thaliana] dbj|BAD94923.1| hypothetical protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain