Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77806 SustainPine v3.0 290
AutoFact: Mitochondrial intermediate peptidase, putative n=1 Tax=Ricinus communis RepID=B9R9Q2_RICCO 7.0e-16
FL-Next: tr=Mitochondrial intermediate peptidase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene77813 SustainPine v3.0 292
AutoFact: Similar to DNAJ proteins [Arabidopsis thaliana] 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperone protein DNAj, putative 6.789e-13
Internal
sp_v3.0_unigene77942 SustainPine v3.0 203
AutoFact: Phosphoribulokinase, chloroplastic n=1 Tax=Spinacia oleracea RepID=KPPR_SPIOL 3.0e-25
FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoribulokinase 0.0
Internal
sp_v3.0_unigene78001 SustainPine v3.0 402
AutoFact: 2Fe-2S iron-sulfur cluster binding domain-containing protein [Arabidopsis thaliana] gb|AAK76639.1| unknown protein [Arabidopsis thaliana] gb|AAM91737.1| unknown protein [Arabidopsis thaliana] gb|AEE86083.1| 2Fe-2S iron-sulfur cluster binding domain-contai 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Electron carrier/ electron transporter/ iron ion binding protein 5.294e-12
C-terminus
sp_v3.0_unigene78086 SustainPine v3.0 327
AutoFact: Glutamine synthetase n=1 Tax=Amanita muscaria RepID=GLNA_AMAMU 9.80909e-45
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
Putative C-terminus
sp_v3.0_unigene78175 SustainPine v3.0 304
AutoFact: transketolase [Coprinopsis cinerea okayama7#130] gb|EAU88185.1| transketolase [Coprinopsis cinerea okayama7#130] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transketolase 2.599e-22
Internal
sp_v3.0_unigene78182 SustainPine v3.0 266
AutoFact: rhodanese-like domain-containing protein [Arabidopsis thaliana] gb|AAK91353.1| AT4g27700/T29A15_190 [Arabidopsis thaliana] gb|AAM16195.1| AT4g27700/T29A15_190 [Arabidopsis thaliana] gb|AEE85383.1| rhodanese-like domain-containing protein [Arabidopsis thal 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene78428 SustainPine v3.0 233
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI 4.0e-29
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene78462 SustainPine v3.0 326
AutoFact: thylakoid membrane phosphoprotein [Arabidopsis thaliana] ref|NP_001031551.1| thylakoid membrane phosphoprotein [Arabidopsis thaliana] sp|Q8LCA1.2|TMP14_ARATH RecName: Full=Thylakoid membrane phosphoprotein 14 kDa, chloroplastic; Flags: Precursor gb|AAC335 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene78565 SustainPine v3.0 251
AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L1, chloroplastic 0.0
Internal
sp_v3.0_unigene78650 SustainPine v3.0 285
AutoFact: VpsA protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NHB0_COPC7 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 1.848e-24
Internal
sp_v3.0_unigene78806 SustainPine v3.0 188
AutoFact: Phosphoribulokinase n=3 Tax=Physcomitrella patens subsp. patens RepID=A9RPJ4_PHYPA 3.0e-15
FL-Next: sp=Phosphoribulokinase, chloroplastic; Spinacia oleracea (Spinach). 0.0
Sma3: Phosphoribulokinase 2.643e-21
Internal
sp_v3.0_unigene78905 SustainPine v3.0 196
AutoFact: Type 1 light-harvesting chlorophyll a/b-binding polypeptide (Fragment) n=1 Tax=Pinus palustris RepID=Q40957_PINPA 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.881e-21
Putative C-terminus
sp_v3.0_unigene78957 SustainPine v3.0 345
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=B8LLK5_PICSI 0.0
FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene79067 SustainPine v3.0 414
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.917e-16
C-terminus
sp_v3.0_unigene79086 SustainPine v3.0 207
AutoFact: [O] COG0542 ATPases with chaperone activity, ATP-binding subunit 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 4.888e-16
Internal
sp_v3.0_unigene79566 SustainPine v3.0 249
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NLD0_PICSI 2.0e-31
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene80127 SustainPine v3.0 217
AutoFact: Chloroplast light-harvesting protein CP29 Lhcb4 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ4_ACEAT 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chlorophyll A/B binding protein, putative 4.59e-09
Putative C-terminus
sp_v3.0_unigene80138 SustainPine v3.0 306
AutoFact: Thylakoid lumenal 17.4 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJT2_RICCO 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80275 SustainPine v3.0 318
AutoFact: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial n=2 Tax=Arabidopsis RepID=FTSHB_ARATH 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protein ftsH, putative 1.698e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain