Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene68756 SustainPine v3.0 262
AutoFact: PGR5-like protein 1A [Arabidopsis thaliana] gb|AEE84677.1| PGR5-like protein 1A [Arabidopsis thaliana] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70111 SustainPine v3.0 360
AutoFact: ferredoxin-NADP(H) oxidoreductase [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferredoxin--NADP reductase 0.0
Internal
sp_v3.0_unigene70549 SustainPine v3.0 242
AutoFact: nucleic acid-binding protein-like [Oryza sativa Japonica Group] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonucleoprotein 9.835e-14
Putative C-terminus
sp_v3.0_unigene70988 SustainPine v3.0 187
AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 7.0e-21
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene71083 SustainPine v3.0 328
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=1 Tax=Solanum lycopersicum RepID=CLPAA_SOLLC 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene71213 SustainPine v3.0 343
AutoFact: Chlorophyll a-b binding protein of LHCII type III, chloroplastic n=11 Tax=Magnoliophyta RepID=CB23_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.749e-18
Putative C-terminus
sp_v3.0_unigene71233 SustainPine v3.0 306
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-33
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 9.3887e-44
Internal
sp_v3.0_unigene71597 SustainPine v3.0 251
AutoFact: peptidylprolyl isomerase [Arabidopsis thaliana] sp|Q9LM71.2|FKBP1_ARATH RecName: Full=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic; Short=PPIase; AltName: Full=Rotamase; Flags: Precursor dbj|BAC42074.1| unknown protein [Arabidop 8.0e-22
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene71699 SustainPine v3.0 352
AutoFact: putative ribose-5-phosphate isomerase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribose-5-phosphate isomerase 2.654e-11
Putative C-terminus
sp_v3.0_unigene71809 SustainPine v3.0 306
AutoFact: Organic cation transporter, putative n=1 Tax=Ricinus communis RepID=B9SY49_RICCO 8.0e-19
FL-Next: sp=Organic cation/carnitine transporter 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene71907 SustainPine v3.0 376
AutoFact: Chlorophyll a-b binding protein 3C, chloroplastic n=40 Tax=Magnoliophyta RepID=CB2G_SOLLC 0.0
FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: LHCP 2.645e-19
Internal
sp_v3.0_unigene71937 SustainPine v3.0 416
AutoFact: Putative chloroplast chlorophyll A-B binding protein type II (Fragment) n=2 Tax=Andropogoneae RepID=Q0H633_SORBI 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.917e-16
C-terminus
sp_v3.0_unigene71945 SustainPine v3.0 353
AutoFact: chloroplast chlorophyll a/b-binding protein [Agave tequilana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 8.372e-24
C-terminus
sp_v3.0_unigene72316 SustainPine v3.0 317
AutoFact: Rhodanese-like domain-containing protein n=3 Tax=Arabidopsis RepID=O48529_ARATH 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene72461 SustainPine v3.0 378
AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 2.215e-17
C-terminus
sp_v3.0_unigene72572 SustainPine v3.0 314
AutoFact: ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana] sp|Q9S834.1|CLPP5_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; AltName: Full=Endopeptidase ClpP5; Short=nClpP5; AltName: Full=nClpP1; Flags: Precur 1.4013e-45
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene73345 SustainPine v3.0 147
AutoFact: ACT domain-containing protein n=3 Tax=Arabidopsis RepID=Q9LZ23_ARATH 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene73477 SustainPine v3.0 439
AutoFact: Chlorophyll a-b binding protein type 2 member 2 (Fragment) n=5 Tax=Coniferales RepID=CB22_PINSY 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 3.607e-29
C-terminus
sp_v3.0_unigene73549 SustainPine v3.0 406
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.4013e-45
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
N-terminus
sp_v3.0_unigene73550 SustainPine v3.0 403
AutoFact: Glutamine synthetase nodule isozyme n=2 Tax=Pisum sativum RepID=GLNA1_PEA 1.0e-24
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain