Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58781 SustainPine v3.0 256
AutoFact: putative chlorophyll a/b binding protein [Triticum turgidum subsp. durum] 9.0e-35
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.837e-21
Internal
sp_v3.0_unigene58928 SustainPine v3.0 180
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 1.0e-18
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene59749 SustainPine v3.0 323
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NSF5_PICSI 1.0e-37
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 5.428e-28
Putative N-terminus
sp_v3.0_unigene60425 SustainPine v3.0 192
AutoFact: Glutathione peroxidase-like protein (Fragment) n=10 Tax=Picea sitchensis RepID=E0Z6W2_PICSI 4.0e-24
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Putative C-terminus
sp_v3.0_unigene60535 SustainPine v3.0 328
AutoFact: cytochrome c oxidase subunit Vb [Arabidopsis thaliana] gb|AEE75707.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana] 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome c oxidase subunit Vb 3.386e-08
N-terminus
sp_v3.0_unigene60858 SustainPine v3.0 116
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=3 Tax=Spermatophyta RepID=Q5TME3_PINTH 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyceraldehyde-3-phosphate dehydrogenase subunit A 1.777e-33
Internal
sp_v3.0_unigene60891 SustainPine v3.0 144
AutoFact: Rubrerythrin domain containing protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mg-protoporphyrin IX monomethyl ester oxidative cyclase 4.6e-25
Internal
sp_v3.0_unigene60977 SustainPine v3.0 136
AutoFact: Dynamin-related protein 1B n=2 Tax=Arabidopsis RepID=DRP1B_ARATH 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 2.258e-17
Internal
sp_v3.0_unigene61015 SustainPine v3.0 282
AutoFact: Type 1 chlorophyll a /b-binding protein n=1 Tax=Pinus sylvestris RepID=Q02069_PINSY 3.0e-28
FL-Next: tr=Type 1 chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Light-harvesting complex I protein Lhca1 8.529e-09
C-terminus
sp_v3.0_unigene61022 SustainPine v3.0 239
AutoFact: Glutathione peroxidase n=1 Tax=Picea sitchensis RepID=A9NS67_PICSI 9.0e-31
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene61219 SustainPine v3.0 376
AutoFact: Os08g0382400 protein n=3 Tax=Oryza sativa RepID=Q6YW78_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase chloroplast 4.107e-09
Internal
sp_v3.0_unigene61980 SustainPine v3.0 253
AutoFact: [Q] COG2124 Cytochrome P450 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Allene oxide synthase 8.112e-32
Internal
sp_v3.0_unigene62819 SustainPine v3.0 238
AutoFact: Similarity to 26S proteasome subunit 4 n=2 Tax=Arabidopsis thaliana RepID=Q9LIM2_ARATH 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 3.642e-08
Internal
sp_v3.0_unigene63779 SustainPine v3.0 242
AutoFact: aldo/keto reductase family-like protein [Oryza sativa Japonica Group] dbj|BAC21407.1| aldo/keto reductase family-like protein [Oryza sativa Japonica Group] 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63890 SustainPine v3.0 212
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 8.0e-22
FL-Next: tr=Chlorophyll a/b-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: LHCP 3.801e-25
Internal
sp_v3.0_unigene64106 SustainPine v3.0 234
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=B8LLK5_PICSI 5.0e-29
FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene64501 SustainPine v3.0 210
AutoFact: 50S ribosomal protein L4, chloroplastic n=1 Tax=Nicotiana tabacum RepID=RK4_TOBAC 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R-protein L4 2.785e-13
Internal
sp_v3.0_unigene65564 SustainPine v3.0 121
AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=3 Tax=Brassicaceae RepID=CA4_ARATH 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chlorophyll a/b-binding protein 1.876e-11
Putative C-terminus
sp_v3.0_unigene65571 SustainPine v3.0 231
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 1.0e-31
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.175e-33
Internal
sp_v3.0_unigene65588 SustainPine v3.0 221
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 2.0e-22
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain