Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene39325 SustainPine v3.0 489
AutoFact: ribulose-phosphate 3-epimerase mature form [Expression vector pFL506] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose-phosphate 3-epimerase 3.812e-12
Internal
sp_v3.0_unigene41130 SustainPine v3.0 236
AutoFact: peroxisome biogenesis protein PEX1 [Arabidopsis thaliana] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 7.622e-11
Internal
sp_v3.0_unigene44366 SustainPine v3.0 702
AutoFact: ATP-dependent metalloprotease FtsH [Prosthecochloris aestuarii DSM 271] gb|ACF46797.1| ATP-dependent metalloprotease FtsH [Prosthecochloris aestuarii DSM 271] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FtsH6-Zea mays FtsH protease 1.576e-07
Internal
sp_v3.0_unigene44606 SustainPine v3.0 827
AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; Spinacia oleracea (Spinach). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene44956 SustainPine v3.0 350
AutoFact: Calmodulin-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RU57_RICCO 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear AAA ATPase (VCP subfamily) (ISS) 1.093e-08
Internal
sp_v3.0_unigene46022 SustainPine v3.0 1483
AutoFact: Bromodomain protein n=2 Tax=Populus trichocarpa RepID=B9HH62_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 6.038e-11
Putative C-terminus
sp_v3.0_unigene46111 SustainPine v3.0 348
AutoFact: Transketolase, putative n=1 Tax=Ricinus communis RepID=B9T0B2_RICCO 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TK 2.465e-22
Internal
sp_v3.0_unigene46396 SustainPine v3.0 534
AutoFact: Cytochrome b6-f complex iron-sulfur subunit n=2 Tax=Picea sitchensis RepID=A9NLM7_PICSI 1.0e-30
FL-Next: sp=Cytochrome b6-f complex iron-sulfur subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome b6-f complex iron-sulfur subunit 0.0
N-terminus
sp_v3.0_unigene47380 SustainPine v3.0 321
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene47859 SustainPine v3.0 819
AutoFact: putative transketolase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TK 4.965e-22
Internal
sp_v3.0_unigene48756 SustainPine v3.0 309
AutoFact: Putative rubisco activase n=1 Tax=Oryza sativa Japonica Group RepID=Q8RU45_ORYSJ 7.0e-28
FL-Next: tr=F3N23.32 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene49245 SustainPine v3.0 340
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230 gb|AAC98044.1| unknown protein [Arabidopsis thaliana] gb|AAO64144.1| unknown protein [Arabidopsi 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene49296 SustainPine v3.0 1012
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=B8LLK5_PICSI 0.0
FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene49389 SustainPine v3.0 221
AutoFact: dynamin-like protein E [Arabidopsis thaliana] emb|CAB75934.1| dynamin-like protein 4 (ADL4) [Arabidopsis thaliana] 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 2.826e-17
Internal
sp_v3.0_unigene49445 SustainPine v3.0 523
AutoFact: Glutathione peroxidase n=1 Tax=Picea sitchensis RepID=A9NS67_PICSI 1.0e-37
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene49772 SustainPine v3.0 435
AutoFact: Carbonic anhydrase n=1 Tax=Picea sitchensis RepID=B8LM78_PICSI 7.0e-26
FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carbonic anhydrase 2.363e-17
C-terminus
sp_v3.0_unigene50177 SustainPine v3.0 674
AutoFact: putative rubisco activase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rubisco activase 8.572e-24
Internal
sp_v3.0_unigene50612 SustainPine v3.0 212
AutoFact: ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana] gb|AED90917.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene50709 SustainPine v3.0 162
AutoFact: 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic n=3 Tax=Camelineae RepID=NCED6_ARATH 1.0e-10
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 6.686e-08
Internal
sp_v3.0_unigene50736 SustainPine v3.0 197
AutoFact: 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic n=2 Tax=Arabidopsis RepID=NCED2_ARATH 2.0e-21
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 6.352e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain