Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene195 SustainPine v3.0 3806
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene457 SustainPine v3.0 3851
AutoFact: Rho GTPase activator, putative 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene874 SustainPine v3.0 1159
AutoFact: Structural molecule, putative n=1 Tax=Ricinus communis RepID=B9SRI7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1443 SustainPine v3.0 3458
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 7, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Cell division protein ftsH, putative 1.876e-14
Complete
sp_v3.0_unigene1514 SustainPine v3.0 1167
AutoFact: chaperone DnaJ-domain containing protein [Arabidopsis thaliana] dbj|BAB09499.1| unnamed protein product [Arabidopsis thaliana] gb|ABN04738.1| At5g59610 [Arabidopsis thaliana] gb|AED97211.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chaperone protein DNAj, putative 1.552e-09
Complete
sp_v3.0_unigene1546 SustainPine v3.0 620
AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene1814 SustainPine v3.0 2228
AutoFact: DnaJ protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperone protein DNAj, putative 1.041e-08
Complete
sp_v3.0_unigene2033 SustainPine v3.0 1016
AutoFact: Allene oxide synthase n=1 Tax=Nicotiana attenuata RepID=Q8W4X8_9SOLA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Allene oxide synthase 0.0
C-terminus
sp_v3.0_unigene2167 SustainPine v3.0 1931
AutoFact: Probable plastid-lipid-associated protein 3, chloroplastic n=2 Tax=Oryza sativa Japonica Group RepID=PAP3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fibrillin 8.043e-12
Complete
sp_v3.0_unigene2341 SustainPine v3.0 459
AutoFact: AAA ATPase, central region; L-lactate dehydrogenase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 2.38e-13
Internal
sp_v3.0_unigene2364 SustainPine v3.0 1328
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|O04616.1|Y4115_ARATH RecName: Full=Uncharacterized protein At4g01150, chloroplastic; Flags: Precursor gb|AAK63864.1|AF389292_1 AT4g01150/F2N1_18 [Arabidopsis thaliana] gb|AAB61025.1| A_IG002N01.18 gene pro 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonine endopeptidase 7.655e-12
Complete
sp_v3.0_unigene2428 SustainPine v3.0 1922
AutoFact: organic cation/carnitine transporter4 [Arabidopsis thaliana] dbj|BAB02242.1| organic anion transporter-like protein [Arabidopsis thaliana] gb|AAR23714.1| At3g20660 [Arabidopsis thaliana] dbj|BAD44187.1| hypothetical protein [Arabidopsis thaliana] gb|AEE76 0.0
FL-Next: sp=Organic cation/carnitine transporter 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene2509 SustainPine v3.0 2346
AutoFact: Ankyrin repeat domain protein, putative n=1 Tax=Ricinus communis RepID=B9RF69_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2683 SustainPine v3.0 2843
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene2919 SustainPine v3.0 1191
AutoFact: nuclear transport factor 2-like protein [Arabidopsis thaliana] gb|AAG51815.1|AC016163_4 unknown protein; 43994-42987 [Arabidopsis thaliana] gb|AAQ89663.1| At1g71480 [Arabidopsis thaliana] dbj|BAD43573.1| unknown protein [Arabidopsis thaliana] dbj|BAD43632 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3105 SustainPine v3.0 2428
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RNX1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 7.714e-16
Complete
sp_v3.0_unigene3249 SustainPine v3.0 1155
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Complete
sp_v3.0_unigene3271 SustainPine v3.0 3137
AutoFact: mamallian P58IPK-like protein [Arabidopsis thaliana] emb|CAB86083.1| putative protein [Arabidopsis thaliana] dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana] gb|AAM62560.1| unknown [Arabidopsis thaliana] gb|AED90562.1| mamall 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S14 2.62e-20
Complete
sp_v3.0_unigene3294 SustainPine v3.0 3226
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.995e-13
Complete
sp_v3.0_unigene3656 SustainPine v3.0 1488
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 1.09596e-41
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain