Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene159783 SustainPine v3.0 354
AutoFact: ZEITLUPE [Mesembryanthemum crystallinum] 5.0e-20
FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene161875 SustainPine v3.0 319
AutoFact: Superoxide dismutase n=1 Tax=Ginkgo biloba RepID=B8YNX9_GINBI 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 3.819e-14
N-terminus
sp_v3.0_unigene163323 SustainPine v3.0 245
AutoFact: Superoxide dismutase n=1 Tax=Ginkgo biloba RepID=B8YNX9_GINBI 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
Putative N-terminus
sp_v3.0_unigene164192 SustainPine v3.0 371
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHY protein 2.247e-11
Internal
sp_v3.0_unigene166346 SustainPine v3.0 177
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167472 SustainPine v3.0 124
AutoFact: Type A response regulator n=1 Tax=Selaginella moellendorffii RepID=D8SLQ9_SELML 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167807 SustainPine v3.0 315
AutoFact: reponse regulator 6 [Musa acuminata] 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-a response regulator 3.49e-07
N-terminus
sp_v3.0_unigene169019 SustainPine v3.0 271
AutoFact: Gly_rich multi-domain protein 7.0e-17
Sma3: Glycine-rich RNA-binding protein 2.56e-14
coding
sp_v3.0_unigene186907 SustainPine v3.0 235
AutoFact: serine/threonine-protein kinase SNT7 [Arabidopsis thaliana] sp|Q9S713.1|STT7_ARATH RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic; AltName: Full=Protein STATE TRANSITION 7; AltName: Full=Stt7 homolog; Flags: Precursor gb|AAG51596.1|AC01 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene188819 SustainPine v3.0 476
AutoFact: Superoxide dismutase n=1 Tax=Ectocarpus siliculosus RepID=D8LI17_ECTSI 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
C-terminus
sp_v3.0_unigene189926 SustainPine v3.0 177
AutoFact: Gly_rich multi-domain protein 1.0e-09
unknown
sp_v3.0_unigene190190 SustainPine v3.0 397
AutoFact: GRP multi-domain protein 2.0e-11
Sma3: Putative glycine rich protein 6.261e-22
coding
sp_v3.0_unigene192016 SustainPine v3.0 554
AutoFact: Superoxide dismutase n=1 Tax=Acanthamoeba castellanii RepID=Q5IZD9_ACACA 0.0
FL-Next: sp=Superoxide dismutase; Pinus pinaster (Maritime pine). 0.0
Sma3: Superoxide dismutase 0.0
C-terminus
sp_v3.0_unigene204625 SustainPine v3.0 411
AutoFact: glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] 3.0e-22
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Complete
sp_v3.0_unigene205666 SustainPine v3.0 431
AutoFact: GRP multi-domain protein 3.0e-14
Sma3: Putative glycine rich protein 1.101e-24
coding
sp_v3.0_unigene208468 SustainPine v3.0 627
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.99967e-42
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene210446 SustainPine v3.0 493
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain