Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene70314 SustainPine v3.0 357
AutoFact: potassium channel [Solanum tuberosum] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 4.771e-28
Internal
sp_v3.0_unigene70852 SustainPine v3.0 188
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T588_RICCO 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 4.522e-13
Internal
sp_v3.0_unigene71300 SustainPine v3.0 235
AutoFact: MAP kinase-like protein [Gossypium hirsutum] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 1.96182e-44
Internal
sp_v3.0_unigene71838 SustainPine v3.0 289
AutoFact: With no lysine kinase n=1 Tax=Glycine max RepID=C0M0P9_SOYBN 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 9.82499e-40
Putative C-terminus
sp_v3.0_unigene72703 SustainPine v3.0 329
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 2.0e-29
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 7.514e-39
Internal
sp_v3.0_unigene74619 SustainPine v3.0 206
AutoFact: Type A response regulator n=1 Tax=Selaginella moellendorffii RepID=D8SLQ9_SELML 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-a response regulator 1.459e-34
Internal
sp_v3.0_unigene75035 SustainPine v3.0 343
AutoFact: ribosomal RNA large subunit methyltransferase F [Arabidopsis thaliana] gb|AAU95411.1| At2g21070 [Arabidopsis thaliana] gb|AAV59276.1| At2g21070 [Arabidopsis thaliana] gb|AEC07118.1| ribosomal RNA large subunit methyltransferase F [Arabidopsis thaliana] 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene75132 SustainPine v3.0 388
AutoFact: potassium channel [Solanum tuberosum] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 3.582e-21
Internal
sp_v3.0_unigene75871 SustainPine v3.0 504
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 2.0e-16
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative C-terminus
sp_v3.0_unigene76053 SustainPine v3.0 226
AutoFact: putative serine/threonine-protein kinase WNK6 [Arabidopsis thaliana] ref|NP_001189928.1| putative serine/threonine-protein kinase WNK6 [Arabidopsis thaliana] sp|Q8S8Y8.1|WNK6_ARATH RecName: Full=Probable serine/threonine-protein kinase WNK6; Short=AtWNK6; 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 1.083e-19
Internal
sp_v3.0_unigene76351 SustainPine v3.0 298
AutoFact: putative serine/threonine-protein kinase WNK9 [Arabidopsis thaliana] sp|Q2V338.1|WNK9_ARATH RecName: Full=Probable serine/threonine-protein kinase WNK9; Short=AtWNK9; AltName: Full=Protein kinase with no lysine 9 dbj|BAF00673.1| mitogen activated protein 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 1.714e-36
Internal
sp_v3.0_unigene77956 SustainPine v3.0 300
AutoFact: inwardly rectifying potassium channel subunit [Daucus carota] 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel AKT1 1.842e-07
Internal
sp_v3.0_unigene94202 SustainPine v3.0 586
AutoFact: putative serine/threonine-protein kinase WNK7 [Arabidopsis thaliana] gb|AAK25846.1|AF360136_1 putative serine/threonine protein kinase [Arabidopsis thaliana] gb|AEE32397.1| putative serine/threonine-protein kinase WNK7 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 6.02558e-44
Internal
sp_v3.0_unigene97112 SustainPine v3.0 285
AutoFact: K+ channel protein n=2 Tax=Populus RepID=Q8S9G1_9ROSI 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inward rectifying potassium channel 4.01e-12
Internal
sp_v3.0_unigene98351 SustainPine v3.0 445
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 4.089e-11
N-terminus
sp_v3.0_unigene99655 SustainPine v3.0 563
AutoFact: MAP kinase-like protein n=1 Tax=Gossypium hirsutum RepID=Q7Y236_GOSHI 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 2.763e-27
N-terminus
sp_v3.0_unigene104339 SustainPine v3.0 283
AutoFact: Potassium channel AKT2/3 n=2 Tax=Arabidopsis RepID=AKT2_ARATH 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.809e-15
Internal
sp_v3.0_unigene106879 SustainPine v3.0 379
AutoFact: serine/threonine-protein kinase WNK1 [Arabidopsis thaliana] sp|Q9CAV6.1|WNK1_ARATH RecName: Full=Serine/threonine-protein kinase WNK1; Short=AtWNK1; AltName: Full=Protein kinase with no lysine 1 gb|AAG51416.1|AC009465_16 putative mitogen activated protein 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 9.59203e-41
Putative N-terminus
sp_v3.0_unigene108912 SustainPine v3.0 265
AutoFact: Circadian clock-associated protein 1b (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=C8KHJ2_PHYPA 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.262e-24
Putative N-terminus
sp_v3.0_unigene119997 SustainPine v3.0 374
AutoFact: Shaker-like potassium channel 1 n=1 Tax=Populus euphratica RepID=D2KPG5_POPEU 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inward rectifying potassium channel 5.971e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain