Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene37250 SustainPine v3.0 679
• AutoFact: Potassium channel AKT1, putative n=1 Tax=Ricinus communis RepID=B9STQ4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 5.462e-31
Internal
sp_v3.0_unigene37860 SustainPine v3.0 809
• AutoFact: Chalcone synthase (Fragment) n=4 Tax=Pseudotsuga RepID=C6F7B7_PSEMZ 2.0e-18
• FL-Next: tr=Pinocembrin chalcone synthase; Pinus densiflora (Japanese red pine). 0.0
• Sma3: Glycine-rich RNA-binding protein 4.62428e-44
C-terminus
sp_v3.0_unigene40699 SustainPine v3.0 636
• AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 2.0e-34
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Sma3: Type-a response regulator 1.173e-38
Putative C-terminus
sp_v3.0_unigene41733 SustainPine v3.0 205
• AutoFact: PREDICTED: similar to FIO1 (FIONA1) n=1 Tax=Vitis vinifera RepID=UPI0001982DB3 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene48581 SustainPine v3.0 151
• AutoFact: protein kinase [Fagus sylvatica] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: With no lysine kinase 3.785e-19
Internal
sp_v3.0_unigene48659 SustainPine v3.0 121
• AutoFact: Inward-rectifying K+ channel n=2 Tax=Eucalyptus camaldulensis RepID=Q93X00_EUCCA 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 6.226e-13
Internal
sp_v3.0_unigene50522 SustainPine v3.0 312
• AutoFact: Type-B response regulator n=1 Tax=Catharanthus roseus RepID=Q71BZ1_CATRO 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 2.323e-30
Internal
sp_v3.0_unigene51496 SustainPine v3.0 705
• AutoFact: Protein CCA1 n=4 Tax=Arabidopsis RepID=CCA1_ARATH 0.0
• FL-Next: Isoform 2 of Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 0.0
C-terminus
sp_v3.0_unigene51653 SustainPine v3.0 318
• AutoFact: K+ channel protein n=2 Tax=Populus RepID=Q8S9G1_9ROSI 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: K+ channel protein 3.13e-10
Putative C-terminus
sp_v3.0_unigene53798 SustainPine v3.0 380
• AutoFact: Potassium channel n=2 Tax=Solanum RepID=Q9LEG6_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 1.263e-33
Internal
sp_v3.0_unigene54299 SustainPine v3.0 402
• AutoFact: protein kinase [Fagus sylvatica] 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: With no lysine kinase 1.505e-35
Internal
sp_v3.0_unigene56674 SustainPine v3.0 473
• AutoFact: MAP kinase-like protein n=1 Tax=Gossypium hirsutum RepID=Q7Y236_GOSHI 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: With no lysine kinase 2.973e-29
N-terminus
sp_v3.0_unigene59441 SustainPine v3.0 268
• AutoFact: serine/threonine-protein kinase WNK1 [Arabidopsis thaliana] sp|Q9CAV6.1|WNK1_ARATH RecName: Full=Serine/threonine-protein kinase WNK1; Short=AtWNK1; AltName: Full=Protein kinase with no lysine 1 gb|AAG51416.1|AC009465_16 putative mitogen activated protein 7.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: With no lysine kinase 1.167e-23
Putative N-terminus
sp_v3.0_unigene59779 SustainPine v3.0 366
• AutoFact: Potassium channel KAT1 n=3 Tax=Arabidopsis RepID=KAT1_ARATH 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inward rectifying potassium channel 1.249e-12
Internal
sp_v3.0_unigene62280 SustainPine v3.0 301
• AutoFact: type-B response regulator [Catharanthus roseus] 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 1.043e-34
Internal
sp_v3.0_unigene63377 SustainPine v3.0 217
• AutoFact: AKT1-like K+ channel LilKT1 n=1 Tax=Lilium longiflorum RepID=A3RG92_LILLO 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 6.912e-25
Internal
sp_v3.0_unigene67072 SustainPine v3.0 434
• AutoFact: LHY protein n=1 Tax=Phaseolus vulgaris RepID=Q8L5P7_PHAVU 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 1.437e-22
N-terminus
sp_v3.0_unigene68099 SustainPine v3.0 212
• AutoFact: Isoform 2 of Probable serine/threonine-protein kinase WNK2 n=1 Tax=Oryza sativa Japonica Group RepID=Q65X23-2 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: With no lysine kinase 3.78351e-44
Internal
sp_v3.0_unigene69255 SustainPine v3.0 290
• AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 9.0e-26
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Sma3: Type-a response regulator 6.216e-39
Internal
sp_v3.0_unigene69595 SustainPine v3.0 299
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SSS7_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: With no lysine kinase 2.333e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain