Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene29675 SustainPine v3.0 1026
AutoFact: Drf_FH1 multi-domain protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich protein 2.6e-19
Complete
sp_v3.0_unigene29755 SustainPine v3.0 718
AutoFact: Terminal flower 2 protein n=5 Tax=Malus x domestica RepID=A7M6G1_MALDO 2.0e-18
FL-Next: sp=Chromo domain-containing protein LHP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LIKE HETEROCHROMATIN PROTEIN 1 5.58e-09
Putative N-terminus
sp_v3.0_unigene29814 SustainPine v3.0 529
AutoFact: pfam00385, Chromo, Chromodomain 2.0e-10
FL-Next: sp=Chromo domain-containing protein LHP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene29868 SustainPine v3.0 936
AutoFact: Gly_rich multi-domain protein 8.0e-18
Sma3: Glycine-rich protein 3.365e-14
coding
sp_v3.0_unigene30102 SustainPine v3.0 950
AutoFact: Drf_FH1 multi-domain protein 1.0e-21
Sma3: Glycine-rich protein 4.83e-14
coding
sp_v3.0_unigene30354 SustainPine v3.0 937
AutoFact: Gly_rich multi-domain protein 8.0e-19
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 8.582e-15
coding
sp_v3.0_unigene30452 SustainPine v3.0 948
AutoFact: Trypan_PARP multi-domain protein 4.0e-18
Sma3: Proline-rich protein 2.601e-14
coding
sp_v3.0_unigene30517 SustainPine v3.0 733
AutoFact: Drf_FH1 multi-domain protein 2.0e-20
Sma3: Glycine-rich protein 2.316e-14
coding
sp_v3.0_unigene33255 SustainPine v3.0 1082
AutoFact: Gly_rich multi-domain protein 2.0e-17
Sma3: Glycine-rich protein 2.968e-14
coding
sp_v3.0_unigene33554 SustainPine v3.0 945
AutoFact: Trypan_PARP multi-domain protein 2.0e-17
Sma3: Glycine-rich protein 1.132e-16
coding
sp_v3.0_unigene33628 SustainPine v3.0 542
AutoFact: Trypan_PARP multi-domain protein 3.0e-15
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.691e-17
coding
sp_v3.0_unigene34175 SustainPine v3.0 977
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene34487 SustainPine v3.0 1981
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 5.762e-11
Putative Complete
sp_v3.0_unigene34648 SustainPine v3.0 486
AutoFact: putative SET domain protein SDG117 [Oryza sativa Japonica Group] 4.0e-14
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: SET domain protein 2.095e-06
C-terminus
sp_v3.0_unigene35633 SustainPine v3.0 599
AutoFact: Trypan_PARP multi-domain protein 9.0e-16
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 2.431e-17
coding
sp_v3.0_unigene36678 SustainPine v3.0 2054
AutoFact: LOB domain protein n=3 Tax=Oryza sativa RepID=Q7XGL4_ORYSJ 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 1.4013e-45
Putative Complete
sp_v3.0_unigene37207 SustainPine v3.0 2019
AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine n-methyltransferase, suvh, putative 1.821e-13
Putative C-terminus
sp_v3.0_unigene37272 SustainPine v3.0 547
AutoFact: DUF3546 domain containing protein 4.0e-31
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: C2H2 zinc-finger protein 2.953e-09
Internal
sp_v3.0_unigene37371 SustainPine v3.0 707
AutoFact: ZZ domain containing protein 4.0e-07
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: Histone acetyltransferase 4.541e-11
Internal
sp_v3.0_unigene40178 SustainPine v3.0 381
AutoFact: RecName: Full=Transcription initiation factor TFIID subunit 1; AltName: Full=TAFII250 dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group] dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group] 2.0e-39
FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain