Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18646 SustainPine v3.0 1400
AutoFact: Anti-silencing protein, putative n=1 Tax=Ricinus communis RepID=B9SPY9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone chaperone 6.501e-16
Complete
sp_v3.0_unigene18769 SustainPine v3.0 2868
AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 3.165e-12
Complete
sp_v3.0_unigene18837 SustainPine v3.0 816
AutoFact: SWI/SNF complex component SNF12-like protein [Arabidopsis thaliana] sp|Q9FMT4.1|SNF12_ARATH RecName: Full=SWI/SNF complex component SNF12 homolog dbj|BAB08296.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38282.1| unknown protein [Arabidopsis th 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWI/SNF transcription activation complex subunit 4.502e-14
C-terminus
sp_v3.0_unigene20459 SustainPine v3.0 1650
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWIRM domain protein 2.541e-12
N-terminus
sp_v3.0_unigene20740 SustainPine v3.0 3473
AutoFact: Cytosine-specific methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTS9_ELAGV 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase 3; Zea mays (Maize). 0.0
Sma3: Cytosine-specific methyltransferase 1.644e-28
Complete
sp_v3.0_unigene22035 SustainPine v3.0 601
AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RPN1_RICCO 2.0e-25
FL-Next: sp=Probable histone-lysine N-methyltransferase ATXR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 8.849e-07
Internal
sp_v3.0_unigene22420 SustainPine v3.0 1101
AutoFact: Drf_FH1 multi-domain protein 2.0e-17
Sma3: Glycine-rich protein 8.155e-17
coding
sp_v3.0_unigene22932 SustainPine v3.0 1851
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene23404 SustainPine v3.0 2929
AutoFact: flowering locus D [Arabidopsis thaliana] 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWIRM domain protein 1.919e-12
Complete
sp_v3.0_unigene25164 SustainPine v3.0 707
AutoFact: putative SET domain protein SDG117 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 6.216e-06
Putative Complete
sp_v3.0_unigene25173 SustainPine v3.0 1042
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RDE1_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 1.334e-36
C-terminus
sp_v3.0_unigene26008 SustainPine v3.0 752
AutoFact: Anti-silencing protein, putative n=1 Tax=Ricinus communis RepID=B9SPY9_RICCO 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone chaperone 1.307e-16
N-terminus
sp_v3.0_unigene27672 SustainPine v3.0 1819
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein arginine N-methyltransferase 1.023e-10
C-terminus
sp_v3.0_unigene28647 SustainPine v3.0 972
AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 6.02558e-44
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
C-terminus
sp_v3.0_unigene28836 SustainPine v3.0 1203
AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene29161 SustainPine v3.0 548
AutoFact: trithorax, putative (EC:2.1.1.43) 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 3.506e-06
Putative Complete
sp_v3.0_unigene29377 SustainPine v3.0 2867
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Sma3: SWIRM domain containing protein, expressed 2.796e-09
Complete
sp_v3.0_unigene29458 SustainPine v3.0 1097
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Glycine-rich protein 2.375e-19
coding
sp_v3.0_unigene29500 SustainPine v3.0 859
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 8.0e-09
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene29619 SustainPine v3.0 637
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 1.0e-06
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.757e-14
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain