Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: pattern specification process

Term: GO:0007389  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12628 SustainPine v3.0 456
AutoFact: APETALA2-like protein 1 n=1 Tax=Pinus thunbergii RepID=Q76H95_PINTH 0.0
FL-Next: tr=APETALA2-like protein 1; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 2.741e-32
Internal
sp_v3.0_unigene13963 SustainPine v3.0 1166
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene16172 SustainPine v3.0 410
AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 2.0e-11
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 1.192e-38
Internal
sp_v3.0_unigene18694 SustainPine v3.0 711
AutoFact: Auxin efflux facilitator SlPIN1 n=1 Tax=Solanum lycopersicum RepID=E5KGD0_SOLLC 9.99967e-42
FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Auxin efflux carrier component 1.93379e-43
C-terminus
sp_v3.0_unigene18825 SustainPine v3.0 3917
AutoFact: AP2 domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9HHX9_POPTR 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene20246 SustainPine v3.0 3599
AutoFact: pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 0.0
FL-Next: sp=Endoglucanase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Endo-1,4-beta-glucanase 1.069e-38
Complete
sp_v3.0_unigene22254 SustainPine v3.0 1537
AutoFact: pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 0.0
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-beta-1,4-glucanase 7.134e-39
C-terminus
sp_v3.0_unigene23681 SustainPine v3.0 524
AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64402_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Endo-1,4-beta-glucanase 1.457e-33
Internal
sp_v3.0_unigene23988 SustainPine v3.0 2896
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene24546 SustainPine v3.0 971
AutoFact: endoglucanase 16 [Arabidopsis thaliana] sp|Q8VYG3.1|GUN16_ARATH RecName: Full=Endoglucanase 16; AltName: Full=Endo-1,4-beta glucanase 16; Flags: Precursor gb|AAL59921.1| putative cellulase [Arabidopsis thaliana] gb|AEE77836.1| endoglucanase 16 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Endo-1,4-beta-glucanase 3.824e-36
Putative N-terminus
sp_v3.0_unigene26696 SustainPine v3.0 869
AutoFact: endoglucanase 5 [Arabidopsis thaliana] sp|Q9M995.1|GUN5_ARATH RecName: Full=Endoglucanase 5; AltName: Full=Endo-1,4-beta glucanase 5; Flags: Precursor gb|AAF69707.1|AC016041_12 F27J15.28 [Arabidopsis thaliana] gb|AAO22749.1| putative glycosyl hydrolase fa 9.0e-36
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-beta-1,4-glucanase 7.108e-21
C-terminus
sp_v3.0_unigene29273 SustainPine v3.0 1185
AutoFact: APETALA2-related transcription factor 2 n=1 Tax=Picea abies RepID=Q9FV33_PICAB 0.0
FL-Next: tr=APETALA2-related transcription factor 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Putative N-terminus
sp_v3.0_unigene34334 SustainPine v3.0 632
AutoFact: Auxin efflux facilitator SlPIN7 n=1 Tax=Solanum lycopersicum RepID=E5KGD2_SOLLC 0.0
FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Auxin efflux carrier component 3.408e-40
Putative N-terminus
sp_v3.0_unigene34589 SustainPine v3.0 783
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 1.87354e-42
N-terminus
sp_v3.0_unigene35673 SustainPine v3.0 982
AutoFact: Endo-1,4-beta-glucanase, putative n=1 Tax=Ricinus communis RepID=B9SP60_RICCO 0.0
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-1,4-beta-glucanase 7.667e-38
C-terminus
sp_v3.0_unigene37311 SustainPine v3.0 1156
AutoFact: pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 0.0
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-1,4-beta-glucanase 1.474e-36
C-terminus
sp_v3.0_unigene37518 SustainPine v3.0 1036
AutoFact: auxin response factor 5 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 3.16497e-41
Internal
sp_v3.0_unigene37523 SustainPine v3.0 1719
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene40083 SustainPine v3.0 510
AutoFact: putative auxin transport protein [Pisum sativum] 0.0
FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Auxin efflux carrier component 0.0
Putative N-terminus
sp_v3.0_unigene48027 SustainPine v3.0 425
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9S0L2_RICCO 6.0e-27
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 1.707e-09
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain