Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photomorphogenesis

Term: GO:0009640  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene36070 SustainPine v3.0 909
• AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook DNA-binding protein 6.453e-18
C-terminus
sp_v3.0_unigene38823 SustainPine v3.0 459
• AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene38832 SustainPine v3.0 509
• AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene40019 SustainPine v3.0 566
• AutoFact: GTP-binding protein yptv3, putative n=1 Tax=Ricinus communis RepID=B9T5U9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAB, member of RAS oncogene family-like 3 4.556e-09
Putative N-terminus
sp_v3.0_unigene40663 SustainPine v3.0 1535
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 4.918e-29
Complete
sp_v3.0_unigene41873 SustainPine v3.0 929
• AutoFact: ABC transporter family protein (Fragment) n=3 Tax=Populus trichocarpa RepID=B9N4E9_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene42348 SustainPine v3.0 940
• AutoFact: DUF296 domain containing protein 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 3.543e-29
N-terminus
sp_v3.0_unigene42656 SustainPine v3.0 567
• AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 1.0e-36
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene44131 SustainPine v3.0 441
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 4.00001e-40
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene44855 SustainPine v3.0 462
• AutoFact: ABC transporter B family member 2 n=2 Tax=Arabidopsis RepID=AB2B_ARATH 3.0e-33
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene46236 SustainPine v3.0 197
• AutoFact: pfam04770, ZF-HD_dimer, ZF-HD protein dimerisation region 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZF-HD homeobox protein 9.06e-26
Internal
sp_v3.0_unigene47461 SustainPine v3.0 422
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene48479 SustainPine v3.0 679
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene49451 SustainPine v3.0 1044
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 6.77e-26
N-terminus
sp_v3.0_unigene50627 SustainPine v3.0 419
• AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein 1, 2, putative 2.49403e-41
Putative C-terminus
sp_v3.0_unigene51361 SustainPine v3.0 399
• AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 5.00264e-43
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene51421 SustainPine v3.0 364
• AutoFact: COL domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIX2_MALDO 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Salt tolerance-like protein 6.451e-08
Internal
sp_v3.0_unigene51860 SustainPine v3.0 233
• AutoFact: Zinc finger, ZZ-type; Zinc finger, C2H2-type n=1 Tax=Medicago truncatula RepID=A2Q2P2_MEDTR 4.0e-37
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene51974 SustainPine v3.0 233
• AutoFact: ABC transporter n=1 Tax=Daphnia pulex RepID=E9GHP1_DAPPU 2.0e-21
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene52736 SustainPine v3.0 176
• AutoFact: Auxin efflux facilitator SlPIN2 n=1 Tax=Solanum lycopersicum RepID=E5KGD3_SOLLC 4.0e-16
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 2.23e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain