Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11761 SustainPine v3.0 1205
• AutoFact: ribosomal protein S1-like RNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB01847.1| unnamed protein product [Arabidopsis thaliana] gb|AAK83625.1| AT3g23700/MYM9_3 [Arabidopsis thaliana] gb|AAM98102.1| At3g23700/MYM9_3 [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene11879 SustainPine v3.0 1747
• AutoFact: 3-ketoacyl-CoA synthase n=7 Tax=Poaceae RepID=C5YVX8_SORBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 7.56701e-44
Complete
sp_v3.0_unigene11883 SustainPine v3.0 1627
• AutoFact: allene oxide cyclase [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Allene oxide cyclase 3.06699e-40
Complete
sp_v3.0_unigene11928 SustainPine v3.0 2503
• AutoFact: ribophorin II (RPN2) family protein [Arabidopsis thaliana] ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12058 SustainPine v3.0 329
• AutoFact: peroxidase 55 [Arabidopsis thaliana] sp|Q96509.1|PER55_ARATH RecName: Full=Peroxidase 55; Short=Atperox P55; AltName: Full=ATP20a; Flags: Precursor emb|CAA67338.1| peroxidase [Arabidopsis thaliana] dbj|BAB08292.1| peroxidase ATP20a [Arabidopsis thaliana] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxidase 5.423e-38
Internal
sp_v3.0_unigene12228 SustainPine v3.0 1314
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AGAMOUS-like protein 4.151e-19
Putative Complete
sp_v3.0_unigene12456 SustainPine v3.0 3075
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• FL-Next: sp=Hexokinase-1; Spinacia oleracea (Spinach). 0.0
• Sma3: Hexokinase 1.12524e-42
Complete
sp_v3.0_unigene12729 SustainPine v3.0 764
• AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 14, putative n=1 Tax=Ricinus communis RepID=B9RKL5_RICCO 0.0
• FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Xyloglucan endotransglucosylase/hydrolase 8.035e-35
C-terminus
sp_v3.0_unigene12747 SustainPine v3.0 1041
• AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
• FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene12872 SustainPine v3.0 3453
• AutoFact: Chaperone protein htpG family protein [Arabidopsis thaliana] gb|AAL32008.1|AF436826_1 At2g04030/F3C11.14 [Arabidopsis thaliana] gb|AAD32922.1| putative heat shock protein [Arabidopsis thaliana] gb|AAK96633.1| At2g04030/F3C11.14 [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Complete
sp_v3.0_unigene12911 SustainPine v3.0 3213
• AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Sucrose synthase 0.0
Complete
sp_v3.0_unigene13020 SustainPine v3.0 1819
• AutoFact: U2 small nuclear ribonucleoprotein A n=1 Tax=Gossypium hirsutum RepID=D6N3G9_GOSHI 0.0
• FL-Next: sp=U2 small nuclear ribonucleoprotein A'; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13040 SustainPine v3.0 3405
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 31 4.022e-08
Complete
sp_v3.0_unigene13114 SustainPine v3.0 962
• AutoFact: Mitogen activated protein kinase 13 n=3 Tax=Pinaceae RepID=C7ENI4_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MAP kinase 2.8026e-45
C-terminus
sp_v3.0_unigene13181 SustainPine v3.0 1665
• AutoFact: Calcineurin B-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZGA7_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calcineurin B, putative 1.284e-26
Complete
sp_v3.0_unigene13276 SustainPine v3.0 3958
• AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene13372 SustainPine v3.0 1112
• AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Picea glauca RepID=Q40846_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 1.25696e-42
Putative C-terminus
sp_v3.0_unigene13504 SustainPine v3.0 3034
• AutoFact: putative protein kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyclin dependent kinase 1.791e-13
C-terminus
sp_v3.0_unigene13513 SustainPine v3.0 1540
• AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.483e-11
Complete
sp_v3.0_unigene13614 SustainPine v3.0 1127
• AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain