Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene207910 SustainPine v3.0 369
AutoFact: Tau class glutathione S-transferase n=2 Tax=Pinus RepID=D3YLT8_9CONI 1.96182e-44
FL-Next: tr=Tau class glutathione S-transferase; Pinus brutia. 0.0
Sma3: Glutathione s-transferase, putative 2.64986e-42
Putative N-terminus
sp_v3.0_unigene208412 SustainPine v3.0 464
AutoFact: cyclin dependent kinase B [Camellia sinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinase 1.035e-13
Putative N-terminus
sp_v3.0_unigene208435 SustainPine v3.0 563
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Sma3: Sucrose synthase 0.0
Internal
sp_v3.0_unigene208468 SustainPine v3.0 627
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.99967e-42
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene208511 SustainPine v3.0 471
AutoFact: RuBisCO subunit binding-protein beta subunit precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 2.34e-10
C-terminus
sp_v3.0_unigene208514 SustainPine v3.0 372
AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Early light-induced protein 5.192e-19
C-terminus
sp_v3.0_unigene208515 SustainPine v3.0 263
AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enolase 0.0
Internal
sp_v3.0_unigene208546 SustainPine v3.0 781
AutoFact: heat shock protein 81-1 [Arabidopsis thaliana] dbj|BAA98082.1| heat-shock protein [Arabidopsis thaliana] gb|AAM91104.1| AT5g52640/F6N7_13 [Arabidopsis thaliana] gb|AAN46890.1| At5g52640/F6N7_13 [Arabidopsis thaliana] gb|AED96244.1| heat shock protein 81-1 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene208570 SustainPine v3.0 913
AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protein kinase, putative 2.929e-15
N-terminus
sp_v3.0_unigene208662 SustainPine v3.0 247
AutoFact: Enolase n=2 Tax=Selaginella moellendorffii RepID=D8R303_SELML 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enolase 1.512e-30
C-terminus
sp_v3.0_unigene208783 SustainPine v3.0 246
AutoFact: RuBisCO large subunit-binding protein subunit beta, chloroplastic n=6 Tax=core eudicotyledons RepID=RUBB_PEA 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 3.515e-11
Internal
sp_v3.0_unigene208813 SustainPine v3.0 101
AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 2.0e-10
FL-Next: sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enolase 0.0
Internal
sp_v3.0_unigene208871 SustainPine v3.0 98
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 1.0e-10
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene209004 SustainPine v3.0 362
AutoFact: Heat shock protein, putative n=1 Tax=Ricinus communis RepID=B9RCG8_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 0.0
N-terminus
sp_v3.0_unigene209121 SustainPine v3.0 560
AutoFact: RuBisCO subunit binding-protein beta subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q56ZP2_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 1.148e-10
C-terminus
sp_v3.0_unigene209304 SustainPine v3.0 369
AutoFact: PREDICTED: similar to ferritin n=2 Tax=Hydra magnipapillata RepID=UPI0001926350 2.0e-28
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene209307 SustainPine v3.0 435
AutoFact: Ribosomal protein L24 n=3 Tax=Perkinsus RepID=A7YXM0_PERCH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 6.311e-11
Putative Complete
sp_v3.0_unigene209335 SustainPine v3.0 763
AutoFact: 78 kDa glucose-regulated protein precursor [Neurospora crassa OR74A] sp|P78695.3|GRP78_NEUCR RecName: Full=78 kDa glucose-regulated protein homolog; Short=GRP-78; AltName: Full=Immunoglobulin heavy chain-binding protein homolog; Short=BiP; Flags: Precurso 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene209448 SustainPine v3.0 944
AutoFact: F-box protein 7 [Arabidopsis thaliana] sp|Q9XI00.1|SKI32_ARATH RecName: Full=F-box protein 7; AltName: Full=SKP1-interacting partner 32 gb|AAD41431.1|AC007727_20 Contains PF|00646 F-box domain. ESTs gb|Z37267, gb|R90412, gb|Z37268 and gb|T88189 come from 0.0
FL-Next: sp=F-box protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene209519 SustainPine v3.0 626
AutoFact: 60S ribosomal protein L25 n=2 Tax=Metarhizium RepID=E9DWA0_METAQ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.412e-10
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain