Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6237 SustainPine v3.0 1825
AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene6267 SustainPine v3.0 1782
AutoFact: F-box protein 7 n=2 Tax=Arabidopsis RepID=SKI32_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6274 SustainPine v3.0 1545
AutoFact: 70 kDa heat shock protein n=5 Tax=BEP clade RepID=Q10SR3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene6366 SustainPine v3.0 3087
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphatidylglycerol specific phospholipase C 1.228e-21
Complete
sp_v3.0_unigene6442 SustainPine v3.0 1812
AutoFact: Cationic peroxidase 1, putative n=1 Tax=Ricinus communis RepID=B9SWU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxidase 0.0
Complete
sp_v3.0_unigene6560 SustainPine v3.0 1213
AutoFact: Peroxidase-like protein (Fragment) n=14 Tax=Picea sitchensis RepID=E0Z9M2_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxidase 0.0
C-terminus
sp_v3.0_unigene6583 SustainPine v3.0 1450
AutoFact: Calcineurin B-like protein 01 n=1 Tax=Selaginella moellendorffii RepID=C4P7X6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calcineurin B, putative 1.419e-26
Complete
sp_v3.0_unigene6675 SustainPine v3.0 1503
AutoFact: Polcalcin (Fragment) n=4 Tax=Pseudotsuga RepID=C6F9H5_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polcalcin Jun o 2 2.54e-09
Complete
sp_v3.0_unigene6678 SustainPine v3.0 1908
AutoFact: peroxidase 63 [Arabidopsis thaliana] sp|Q9FL16.1|PER63_ARATH RecName: Full=Peroxidase 63; Short=Atperox P63; AltName: Full=ATP26a; Flags: Precursor dbj|BAB10896.1| peroxidase ATP26a homolog [Arabidopsis thaliana] dbj|BAC43229.1| putative peroxidase ATP26a 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative peroxidase 1.218e-23
Complete
sp_v3.0_unigene6709 SustainPine v3.0 1549
AutoFact: calcineurin B-like protein 3 [Populus euphratica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calcineurin B, putative 1.536e-26
Complete
sp_v3.0_unigene6779 SustainPine v3.0 1193
AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gb|AAC09322.1| dimethyladenosine transferase [Arabidopsis thaliana] dbj|BAC42078.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAO50630.1| putative dimethyladeno 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 9.276e-09
Complete
sp_v3.0_unigene6808 SustainPine v3.0 2395
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histidine kinase 2.131e-31
Complete
sp_v3.0_unigene6864 SustainPine v3.0 1179
AutoFact: Zinc finger CCCH domain-containing protein 20 n=2 Tax=Arabidopsis RepID=C3H20_ARATH 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zn-finger transcription factor 4.501e-15
Internal
sp_v3.0_unigene6871 SustainPine v3.0 1700
AutoFact: inositol polyphosphate 1-phosphatase [Arabidopsis thaliana] gb|AED97825.1| inositol polyphosphate 1-phosphatase [Arabidopsis thaliana] 0.0
FL-Next: sp=SAL1 phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 3'(2'),5'-bisphosphate nucleotidase 2.821e-18
Complete
sp_v3.0_unigene6914 SustainPine v3.0 1039
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 0.0
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Sma3: F-box family protein 0.0
N-terminus
sp_v3.0_unigene6959 SustainPine v3.0 3341
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAF87863.1|AC022520_7 similar to cdc2 protein kinase [Arabidopsis thaliana] gb|AEE32884.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CDKC 1.332e-15
Complete
sp_v3.0_unigene7289 SustainPine v3.0 1442
AutoFact: Potassium channel TORK1 n=1 Tax=Nicotiana tabacum RepID=Q5NT78_TOBAC 3.0e-32
FL-Next: sp=Potassium channel KOR1; Oryza sativa subsp. japonica (Rice). 0.0
Misassembled
sp_v3.0_unigene7311 SustainPine v3.0 2163
AutoFact: beta-amylase PCT-BMYI [Solanum tuberosum] 0.0
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-amylase 0.0
Complete
sp_v3.0_unigene7344 SustainPine v3.0 1402
AutoFact: calcium-binding pollen allergen [Arachis hypogaea] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polcalcin Jun o 2 1.069e-12
Complete
sp_v3.0_unigene7440 SustainPine v3.0 1921
AutoFact: Histidine kinase 1, 2, 3 plant, putative n=1 Tax=Ricinus communis RepID=B9T0D3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histidine kinase 1.525e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain