Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3713 SustainPine v3.0 3726
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histidine kinase 2.911e-31
C-terminus
sp_v3.0_unigene3810 SustainPine v3.0 1956
AutoFact: SKP1 interacting partner 4 [Arabidopsis thaliana] sp|Q9M2C9.1|SKIP4_ARATH RecName: Full=F-box/kelch-repeat protein SKIP4; AltName: Full=SKP1-interacting partner 4 emb|CAB71065.1| putative protein [Arabidopsis thaliana] gb|ABF18998.1| At3g61350 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3839 SustainPine v3.0 1618
AutoFact: Calcineurin B-like protein 01 n=1 Tax=Selaginella moellendorffii RepID=C4P7X6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calcineurin B, putative 1.419e-26
Complete
sp_v3.0_unigene3935 SustainPine v3.0 4389
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene4000 SustainPine v3.0 1366
AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gb|AAC09322.1| dimethyladenosine transferase [Arabidopsis thaliana] dbj|BAC42078.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAO50630.1| putative dimethyladeno 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 9.276e-09
Complete
sp_v3.0_unigene4247 SustainPine v3.0 407
AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enolase 0.0
Internal
sp_v3.0_unigene4256 SustainPine v3.0 592
AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enolase 0.0
Putative C-terminus
sp_v3.0_unigene4264 SustainPine v3.0 499
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.576e-39
Internal
sp_v3.0_unigene4384 SustainPine v3.0 503
AutoFact: serine acetyltransferase 7 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine acetyltransferase 2.825e-33
Internal
sp_v3.0_unigene4424 SustainPine v3.0 891
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.935e-17
Putative Complete
sp_v3.0_unigene4481 SustainPine v3.0 868
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 5.939e-30
Complete
sp_v3.0_unigene4557 SustainPine v3.0 354
AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NPU7_PICSI 1.0e-07
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 2.371e-23
N-terminus
sp_v3.0_unigene4560 SustainPine v3.0 1951
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Sma3: Sucrose synthase 0.0
C-terminus
sp_v3.0_unigene4770 SustainPine v3.0 704
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
FL-Next: tr=Germin-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Germin-like protein 7.318e-17
Complete
sp_v3.0_unigene4771 SustainPine v3.0 555
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 6.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene4791 SustainPine v3.0 431
AutoFact: Sucrose synthase, putative n=1 Tax=Ricinus communis RepID=B9SAU6_RICCO 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Sma3: Sucrose synthase 0.0
Internal
sp_v3.0_unigene4810 SustainPine v3.0 803
AutoFact: Cell division control protein 15 , cdc15, putative n=1 Tax=Ricinus communis RepID=B9S4I8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.409e-13
Internal
sp_v3.0_unigene4903 SustainPine v3.0 641
AutoFact: 3-ketoacyl-CoA synthase n=7 Tax=Poaceae RepID=Q10PV5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-coa synthase family protein 4.281e-37
C-terminus
sp_v3.0_unigene4937 SustainPine v3.0 564
AutoFact: Histidine kinase 2 (Fragment) n=1 Tax=Betula pendula RepID=B8QJH1_BETPN 1.0e-36
FL-Next: sp=Histidine kinase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histidine kinase 6.446e-32
Internal
sp_v3.0_unigene4972 SustainPine v3.0 744
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 7.883e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain