Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene27472 SustainPine v3.0 1055
AutoFact: putative ribosomal S1 protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99860.1| S1 RNA binding domain containing protein, expressed [Oryza sativa Japonica Group] gb|EEC76515.1| hypothetical protein OsI_14295 [Oryza sativa Indica Gro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27728 SustainPine v3.0 409
AutoFact: Haem peroxidase, plant/fungal/bacterial n=1 Tax=Medicago truncatula RepID=A2Q4C1_MEDTR 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative peroxidase 3.368e-21
N-terminus
sp_v3.0_unigene27773 SustainPine v3.0 459
AutoFact: TPA: class III peroxidase 89 precursor [Oryza sativa Japonica Group] gb|EAZ38042.1| hypothetical protein OsJ_22386 [Oryza sativa Japonica Group] gb|EEC81190.1| hypothetical protein OsI_24196 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxidase 3.24961e-42
Internal
sp_v3.0_unigene27780 SustainPine v3.0 623
AutoFact: Beta-amylase (Fragment) n=5 Tax=Pseudotsuga RepID=C6F9P9_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-amylase 0.0
C-terminus
sp_v3.0_unigene27830 SustainPine v3.0 1261
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein A, putative n=1 Tax=Ricinus communis RepID=B9S7W0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.07199e-41
Complete
sp_v3.0_unigene27874 SustainPine v3.0 545
AutoFact: Putative 60S ribosomal protein RPL26 n=1 Tax=Phoronis muelleri RepID=B2YI44_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 6.311e-11
Complete
sp_v3.0_unigene27986 SustainPine v3.0 521
AutoFact: Xyloglucan endotransglycosylase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q9SDX0_SOLLC 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.351e-36
N-terminus
sp_v3.0_unigene28086 SustainPine v3.0 916
AutoFact: auxin-regulated protein [Phaseolus vulgaris] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SAUR family protein 2.28e-35
Complete
sp_v3.0_unigene28218 SustainPine v3.0 985
AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 7.524e-33
Complete
sp_v3.0_unigene28558 SustainPine v3.0 759
AutoFact: peroxiredoxin [Globodera rostochiensis] 0.0
FL-Next: tr=Peroxiredoxin-2; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
Sma3: Thioredoxin peroxidase 4.076e-16
Complete
sp_v3.0_unigene28845 SustainPine v3.0 1489
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.814e-13
Internal
sp_v3.0_unigene28978 SustainPine v3.0 504
AutoFact: ERF transcription factor n=1 Tax=Camellia sinensis RepID=D3Y3E0_CAMSI 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.3985e-42
C-terminus
sp_v3.0_unigene29072 SustainPine v3.0 1087
AutoFact: Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAM47616.1|AC122147_5 Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAP51983.1| Protein kinase domain containing protein [Oryza sativa Japonica Group] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen-activated protein kinase kinase kinase, putative 1.481e-10
Internal
sp_v3.0_unigene29299 SustainPine v3.0 743
AutoFact: Shaker-like potassium channel n=4 Tax=Vitis vinifera RepID=Q84LA0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene29458 SustainPine v3.0 1097
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Glycine-rich protein 2.375e-19
coding
sp_v3.0_unigene29472 SustainPine v3.0 1224
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.799e-33
Complete
sp_v3.0_unigene29500 SustainPine v3.0 859
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 8.0e-09
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene29579 SustainPine v3.0 1319
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.824e-36
Complete
sp_v3.0_unigene29619 SustainPine v3.0 637
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 1.0e-06
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.757e-14
coding
sp_v3.0_unigene29675 SustainPine v3.0 1026
AutoFact: Drf_FH1 multi-domain protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich protein 2.6e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain