Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17592 SustainPine v3.0 1048
• AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Complete
sp_v3.0_unigene17597 SustainPine v3.0 1712
• AutoFact: serine/threonine protein kinase 2 [Arabidopsis thaliana] ref|NP_850543.1| serine/threonine protein kinase 2 [Arabidopsis thaliana] sp|Q39030.2|KPK2_ARATH RecName: Full=Serine/threonine-protein kinase AtPK2/AtPK19; AltName: Full=Ribosomal-protein S6 kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase AtPK19 6.836e-08
N-terminus
sp_v3.0_unigene17635 SustainPine v3.0 564
• AutoFact: Ethylene responsive element binding protein C4 n=2 Tax=Capsicum annuum RepID=Q32W72_CAPAN 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene17679 SustainPine v3.0 1159
• AutoFact: [O] COG0326 Molecular chaperone, HSP90 family 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene17692 SustainPine v3.0 1034
• AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene17717 SustainPine v3.0 1542
• AutoFact: Mitogen activated protein kinase 1 n=2 Tax=Selaginella moellendorffii RepID=D8QQG3_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MAP kinase 9.593e-39
Complete
sp_v3.0_unigene17917 SustainPine v3.0 2507
• AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Sucrose synthase 0.0
C-terminus
sp_v3.0_unigene17959 SustainPine v3.0 1006
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 1.86e-21
Complete
sp_v3.0_unigene17960 SustainPine v3.0 1217
• AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 8.03e-36
Complete
sp_v3.0_unigene18115 SustainPine v3.0 1023
• AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 2.943e-32
C-terminus
sp_v3.0_unigene18176 SustainPine v3.0 1277
• AutoFact: pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein HVA22, putative 1.422e-15
Complete
sp_v3.0_unigene18320 SustainPine v3.0 668
• AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 6.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene18326 SustainPine v3.0 2630
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene18459 SustainPine v3.0 854
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 2.23e-21
Complete
sp_v3.0_unigene18665 SustainPine v3.0 627
• AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene18688 SustainPine v3.0 1377
• AutoFact: Mitogen activated protein kinase 16 n=1 Tax=Selaginella moellendorffii RepID=D8QN49_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen-activated protein kinase 1.035e-30
Putative N-terminus
sp_v3.0_unigene18759 SustainPine v3.0 2711
• AutoFact: Protein phosphtase 2C n=1 Tax=Marchantia polymorpha RepID=D3W6X9_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2C 8.149e-24
Complete
sp_v3.0_unigene18960 SustainPine v3.0 437
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L125_MALDO 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene18967 SustainPine v3.0 419
• AutoFact: Catalase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RDR1_PHYPA 0.0
• FL-Next: sp=Catalase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Catalase 0.0
N-terminus
sp_v3.0_unigene18995 SustainPine v3.0 1342
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 31 3.439e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain