Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: MULE transposase domain

Term: IPR018289  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene189430 SustainPine v3.0 299
AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q8H7X6_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.72e-16
Putative Complete
sp_v3.0_unigene189712 SustainPine v3.0 367
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.533e-23
Internal
sp_v3.0_unigene189881 SustainPine v3.0 346
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 2.0e-36
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 9.588e-20
Putative C-terminus
sp_v3.0_unigene192177 SustainPine v3.0 694
AutoFact: polyprotein [Glycine max] 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 5.375e-10
Putative Complete
sp_v3.0_unigene197250 SustainPine v3.0 139
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.107e-17
Putative C-terminus
sp_v3.0_unigene199038 SustainPine v3.0 318
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
Sma3: RNA-directed DNA polymerase (Reverse transcriptase) 3.95e-14
Internal
sp_v3.0_unigene202728 SustainPine v3.0 608
AutoFact: Protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRR0_SOYBN 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 1.208e-07
C-terminus
sp_v3.0_unigene203189 SustainPine v3.0 763
AutoFact: rve domain containing protein 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene207370 SustainPine v3.0 357
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.093e-16
Putative C-terminus
sp_v3.0_unigene207399 SustainPine v3.0 464
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 1.4013e-45
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.889e-16
Putative C-terminus
sp_v3.0_unigene207417 SustainPine v3.0 266
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 8.062e-13
Putative C-terminus
sp_v3.0_unigene207495 SustainPine v3.0 1228
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.349e-16
C-terminus
sp_v3.0_unigene208621 SustainPine v3.0 575
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.444e-28
Internal
sp_v3.0_unigene210063 SustainPine v3.0 173
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.091e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain