Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene152282
|
SustainPine v3.0
|
420
|
• AutoFact: DEAD box helicase n=1 Tax=Ectocarpus siliculosus RepID=D8LJE9_ECTSI
|
1.0e-35
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Dead box ATP-dependent RNA helicase, putative
|
3.009e-10
|
|
C-terminus
|
sp_v3.0_unigene152622
|
SustainPine v3.0
|
431
|
• AutoFact: Polyadenylate-binding protein 1-B n=2 Tax=Phytophthora infestans T30-4 RepID=D0MV08_PHYIT
|
9.0e-23
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Poly(A)-binding protein
|
1.972e-13
|
|
Putative C-terminus
|
sp_v3.0_unigene152660
|
SustainPine v3.0
|
456
|
• AutoFact: [K] COG1958 Small nuclear ribonucleoprotein (snRNP) homolog
|
3.0e-18
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Small nuclear ribonucleoprotein f, putative
|
6.913e-09
|
|
C-terminus
|
sp_v3.0_unigene152768
|
SustainPine v3.0
|
445
|
• AutoFact: Pre-mRNA branch site protein p14 n=3 Tax=Culicidae RepID=B0WN88_CULQU
|
3.9937e-43
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Pre-mRNA branch site p14-like protein
|
6.096e-09
|
|
Complete
|
sp_v3.0_unigene152906
|
SustainPine v3.0
|
413
|
• AutoFact: Putative DEAD/DEAH box helicase n=1 Tax=Trichinella spiralis RepID=E5SYL4_TRISP
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: DEAD-box ATP-dependent RNA helicase 21
|
1.116e-07
|
|
C-terminus
|
sp_v3.0_unigene153552
|
SustainPine v3.0
|
475
|
• AutoFact: Pre-mRNA branch site protein p14 n=23 Tax=Euteleostomi RepID=PM14_HUMAN
|
1.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Pre-mRNA branch site p14-like protein
|
6.096e-09
|
|
Complete
|
sp_v3.0_unigene153613
|
SustainPine v3.0
|
375
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
8.0e-13
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Putative splicing factor
|
3.93e-07
|
|
C-terminus
|
sp_v3.0_unigene153704
|
SustainPine v3.0
|
236
|
• AutoFact: Probable serine/threonine-protein kinase ireA n=1 Tax=Dictyostelium discoideum RepID=IREA_DICDI
|
2.0e-18
|
• FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga).
|
0.0
|
• Sma3: Key regulator in ER unfolded protein response
|
9.747e-06
|
|
Internal
|
sp_v3.0_unigene153734
|
SustainPine v3.0
|
388
|
• AutoFact: small nuclear ribonucleoprotein F [Arabidopsis thaliana] ref|XP_002867361.1| hypothetical protein ARALYDRAFT_913456 [Arabidopsis lyrata subsp. lyrata] ref|XP_002885912.1| hypothetical protein ARALYDRAFT_899645 [Arabidopsis lyrata subsp. lyrata] sp|Q9SUM2.
|
1.0e-24
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Small nuclear ribonucleoprotein f, putative
|
6.913e-09
|
|
Putative Complete
|
sp_v3.0_unigene154600
|
SustainPine v3.0
|
278
|
• AutoFact: PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated [Tribolium castaneum]
|
6.0e-22
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Probable U6 snRNA-associated Sm-like protein LSm4
|
4.227e-13
|
|
Internal
|
sp_v3.0_unigene154723
|
SustainPine v3.0
|
365
|
• AutoFact: U2 small nuclear RNA auxiliary factor 1 (Fragment) n=1 Tax=Microcosmus squamiger RepID=E3PQY0_9ASCI
|
9.99967e-42
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: U2 snrnp auxiliary factor, small subunit, putative
|
1.517e-11
|
|
Internal
|
sp_v3.0_unigene155756
|
SustainPine v3.0
|
425
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
6.0e-22
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Pre-mRNA branch site p14-like protein
|
6.096e-09
|
|
Complete
|
sp_v3.0_unigene156294
|
SustainPine v3.0
|
223
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
4.0e-24
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
sp_v3.0_unigene156483
|
SustainPine v3.0
|
419
|
• AutoFact: putative pre-rRNA processing protein, 5' partial [Arabidopsis thaliana]
|
4.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Internal
|
sp_v3.0_unigene156666
|
SustainPine v3.0
|
411
|
• AutoFact: spliceosome associated protein-like [Arabidopsis thaliana] emb|CAB81273.1| spliceosome associated protein-like [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
• Sma3: Spliceosome associated protein-like
|
7.485e-09
|
|
Internal
|
sp_v3.0_unigene157432
|
SustainPine v3.0
|
457
|
• AutoFact: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Danio rerio] sp|Q6PC19.1|SSU72_DANRE RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase SSU72; Short=CTD phosphatase SSU72 gb|AAH59504.1| Zgc:73143 [Danio rerio]
|
2.0e-35
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene158193
|
SustainPine v3.0
|
456
|
• AutoFact: polypyrimidine tract binding protein-like [Danio rerio]
|
3.0e-26
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene158226
|
SustainPine v3.0
|
256
|
• AutoFact: pre-mRNA branch site protein p14 [Arabidopsis thaliana] ref|XP_002873554.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] sp|Q9FMP4.1|PM14_ARATH RecName: Full=Pre-mRNA branch site p14-like protein dbj|BAB10037.1| unnamed prot
|
7.0e-19
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Pre-mRNA branch site p14-like protein
|
6.096e-09
|
|
C-terminus
|
sp_v3.0_unigene158826
|
SustainPine v3.0
|
413
|
• AutoFact: PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like n=1 Tax=Monodelphis domestica RepID=UPI00020F7832
|
2.8026e-45
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene159102
|
SustainPine v3.0
|
265
|
• AutoFact: glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40] ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus flavus NRRL3357] dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40] gb|EED53406.1| heterogen
|
1.0e-21
|
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Glycine-rich RNA-binding protein
|
7.776e-30
|
|
N-terminus
|