Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA ligase, ATP-dependent, conserved site

Term: IPR016059  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene136285 SustainPine v3.0 368
AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 0.0
FL-Next: sp=Abietadiene synthase, chloroplastic; Abies grandis (Grand fir). 0.0
Sma3: Copalyl diphosphate synthase 5.811e-27
Internal
sp_v3.0_unigene138297 SustainPine v3.0 510
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RG14_RICCO 5.0e-22
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
Putative C-terminus
sp_v3.0_unigene139964 SustainPine v3.0 394
AutoFact: Frizzy panicle n=11 Tax=Oryza RepID=Q8H3Q1_ORYSJ 3.0e-25
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene140377 SustainPine v3.0 384
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene141074 SustainPine v3.0 457
AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Copalyl diphosphate synthase 6.301e-29
Internal
sp_v3.0_unigene141891 SustainPine v3.0 600
AutoFact: Monoglyceride lipase, putative n=1 Tax=Ricinus communis RepID=B9SAR9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative phospholipase 7.916e-21
N-terminus
sp_v3.0_unigene142567 SustainPine v3.0 362
AutoFact: Ethylene-responsive transcription factor 4 n=4 Tax=Nicotiana RepID=ERF4_NICSY 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.285e-28
Putative N-terminus
sp_v3.0_unigene143521 SustainPine v3.0 347
AutoFact: PARP domain containing protein 4.0e-06
FL-Next: sp=Inactive poly [ADP-ribose] polymerase RCD1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene144271 SustainPine v3.0 542
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: tr=Putative abietadiene synthase; Pinus densiflora (Japanese red pine). 0.0
Sma3: Copalyl diphosphate synthase 1.173e-27
Internal
sp_v3.0_unigene144489 SustainPine v3.0 516
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene144766 SustainPine v3.0 751
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene144980 SustainPine v3.0 1161
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR domain protein 3.433e-08
Putative Complete
sp_v3.0_unigene145396 SustainPine v3.0 606
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene145456 SustainPine v3.0 476
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene149396 SustainPine v3.0 293
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene156061 SustainPine v3.0 234
AutoFact: ATP synthase subunit alpha n=2 Tax=Polaribacter RepID=A2TYK2_9FLAO 8.0e-35
FL-Next: sp=ATP synthase subunit alpha, chloroplastic; Agathis australis (Kauri) (Dammara australis). Plastid; Chloroplast. 0.0
Sma3: F-ATPase subunit alpha 0.0
Internal
sp_v3.0_unigene158266 SustainPine v3.0 468
AutoFact: Photosystem I reaction center subunit N n=3 Tax=Chlamydomonas RepID=A8I835_CHLRE 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem I reaction center subunit N, chloroplastic 7.606e-13
Putative Complete
sp_v3.0_unigene159225 SustainPine v3.0 308
AutoFact: Ethylene-responsive transcription factor ERF114 n=3 Tax=Arabidopsis RepID=EF114_ARATH 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 7.402e-36
Internal
sp_v3.0_unigene160522 SustainPine v3.0 462
AutoFact: E-alpha-bisabolene synthase n=1 Tax=Picea abies RepID=Q675L6_PICAB 0.0
FL-Next: tr=E-alpha-bisabolene synthase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ent-copalyl diphosphate synthase 4.178e-29
Internal
sp_v3.0_unigene162673 SustainPine v3.0 452
AutoFact: DNA ligase n=1 Tax=Sorghum bicolor RepID=C5WXG6_SORBI 3.0e-23
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 8.098e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain