Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, MYND-type

Term: IPR002893  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene138193 SustainPine v3.0 389
AutoFact: Histone-lysine N-methyltransferase ATXR2 n=2 Tax=Arabidopsis RepID=ATXR2_ARATH 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150135 SustainPine v3.0 411
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nematostella vectensis RepID=A7RVV5_NEMVE 8.00001e-41
FL-Next: sp=Putative ubiquitin carboxyl-terminal hydrolase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 9.447e-27
Internal
sp_v3.0_unigene150246 SustainPine v3.0 258
AutoFact: proteasome subunit beta type-2-A [Arabidopsis thaliana] sp|O23714.1|PSB2A_ARATH RecName: Full=Proteasome subunit beta type-2-A; AltName: Full=20S proteasome beta subunit D-1; AltName: Full=Proteasome component GB; AltName: Full=Proteasome subunit beta typ 1.0e-21
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-4 3.753e-08
Internal
sp_v3.0_unigene165376 SustainPine v3.0 380
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYND finger family protein 5.881e-08
Internal
sp_v3.0_unigene168095 SustainPine v3.0 256
AutoFact: ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana] sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName: Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName: Full=Ubiquitin thiolesterase 17; AltName: Ful 2.0e-15
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 0.0
Sma3: Putative ubiquitin-specific protease 3.176e-12
Internal
sp_v3.0_unigene183282 SustainPine v3.0 352
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana GN=ASHR2 0.0
Internal
sp_v3.0_unigene183350 SustainPine v3.0 491
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene184635 SustainPine v3.0 310
AutoFact: zf-MYND domain containing protein 3.0e-10
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: cDNA clone:J023091N20, full insert sequence 7.797e-06
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain