Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: root development

Term: GO:0048364  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18837 SustainPine v3.0 816
AutoFact: SWI/SNF complex component SNF12-like protein [Arabidopsis thaliana] sp|Q9FMT4.1|SNF12_ARATH RecName: Full=SWI/SNF complex component SNF12 homolog dbj|BAB08296.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38282.1| unknown protein [Arabidopsis th 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWI/SNF transcription activation complex subunit 4.502e-14
C-terminus
sp_v3.0_unigene18844 SustainPine v3.0 845
AutoFact: Lipoxygenase n=1 Tax=Camellia sinensis RepID=A8W7J7_CAMSI 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene19153 SustainPine v3.0 1854
AutoFact: Lipoxygenase n=2 Tax=Populus trichocarpa RepID=B9HJW6_POPTR 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene20459 SustainPine v3.0 1650
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWIRM domain protein 2.541e-12
N-terminus
sp_v3.0_unigene20521 SustainPine v3.0 486
AutoFact: Casein kinase n=1 Tax=Beta vulgaris RepID=A2I5G0_BETVU 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase, putative 1.113e-22
N-terminus
sp_v3.0_unigene21766 SustainPine v3.0 517
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene21920 SustainPine v3.0 461
AutoFact: Diacylglycerol kinase, theta, putative n=1 Tax=Ricinus communis RepID=B9RLR5_RICCO 5.0e-37
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene21966 SustainPine v3.0 821
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 1 protein, putative 5.034e-19
C-terminus
sp_v3.0_unigene22043 SustainPine v3.0 959
AutoFact: PREDICTED: similar to PLDP1 (PHOSPHOLIPASE D ZETA1); phospholipase D n=1 Tax=Vitis vinifera RepID=UPI0001983212 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene22180 SustainPine v3.0 356
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 7.803e-32
Internal
sp_v3.0_unigene22280 SustainPine v3.0 665
AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cycloartenol synthase 0.0
C-terminus
sp_v3.0_unigene22397 SustainPine v3.0 649
AutoFact: armadillo repeat-containing kinesin-like protein 3 [Arabidopsis thaliana] sp|Q9FZ06.1|ARK3_ARATH RecName: Full=Armadillo repeat-containing kinesin-like protein 3; AltName: Full=Phosphatidic acid kinase gb|AAG08965.1|AF159052_1 kinesin-like protein [Arabid 0.0
FL-Next: sp=Armadillo repeat-containing kinesin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Kinesin-II 85 kDa subunit, putative 1.738e-08
Internal
sp_v3.0_unigene22580 SustainPine v3.0 3531
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
FL-Next: Isoform 2 of Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 0.0
Sma3: Homeobox protein, putative 3.486e-21
Complete
sp_v3.0_unigene22793 SustainPine v3.0 986
AutoFact: Serine/threonine-protein kinase OXI1 n=2 Tax=Arabidopsis RepID=OXI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 1.452e-36
C-terminus
sp_v3.0_unigene23404 SustainPine v3.0 2929
AutoFact: flowering locus D [Arabidopsis thaliana] 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWIRM domain protein 1.919e-12
Complete
sp_v3.0_unigene23790 SustainPine v3.0 2865
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=B8LLK5_PICSI 0.0
FL-Next: sp=Linoleate 9S-lipoxygenase A; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Lipoxygenase 0.0
Complete
sp_v3.0_unigene25858 SustainPine v3.0 487
AutoFact: guanine nucleotide binding protein beta polypeptide 2-like 1 [Lethenteron japonicum] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 1.034e-18
C-terminus
sp_v3.0_unigene26344 SustainPine v3.0 1295
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 5.60519e-45
FL-Next: tr=Putative MADS domain transcription factor GGM10; Gnetum gnemon (Bago) (Gnetum acutatum). 0.0
Sma3: MADS-box transcription factor 1.008e-23
Complete
sp_v3.0_unigene26753 SustainPine v3.0 832
AutoFact: GTP-binding protein alpha subunit, gna, putative n=1 Tax=Ricinus communis RepID=B9T5D0_RICCO 1.00053e-42
FL-Next: tr=GTP-binding protein alpha subunit, gna, putative; Ricinus communis (Castor bean). 0.0
Sma3: GTP-binding protein alpha subunit, gna, putative 3.67e-08
Internal
sp_v3.0_unigene26766 SustainPine v3.0 765
AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cycloartenol synthase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain