Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: root development

Term: GO:0048364  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene93736 SustainPine v3.0 940
• AutoFact: Unassigned protein
• FL-Next: sp=Auxin transport protein BIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene93753 SustainPine v3.0 1754
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 3.006e-17
C-terminus
sp_v3.0_unigene93871 SustainPine v3.0 2257
• AutoFact: Os02g0244300 protein n=3 Tax=Oryza sativa RepID=Q0E2F9_ORYSJ 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative ubiquitin-specific protease 7.917e-11
Putative C-terminus
sp_v3.0_unigene94019 SustainPine v3.0 1119
• AutoFact: Auxin response factor-like protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBL7_CUCME 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 2.463e-28
N-terminus
sp_v3.0_unigene94093 SustainPine v3.0 1881
• AutoFact: TRANSPARENT TESTA 1 protein, putative n=1 Tax=Ricinus communis RepID=B9RIA2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 1 protein, putative 5.888e-19
Complete
sp_v3.0_unigene94154 SustainPine v3.0 1425
• AutoFact: TRANSPARENT TESTA 1 protein, putative n=1 Tax=Ricinus communis RepID=B9SL66_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 1 protein, putative 5.034e-19
Putative Complete
sp_v3.0_unigene94204 SustainPine v3.0 487
• AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 0.0
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene94295 SustainPine v3.0 715
• AutoFact: E3 ubiquitin-protein ligase UBR4 [Arabidopsis thaliana] sp|Q9SRU2.2|BIG_ARATH RecName: Full=Auxin transport protein BIG; AltName: Full=Protein ATTENUATED SHADE AVOIDANCE 1; AltName: Full=Protein CORYMBOSA1; AltName: Full=Protein DARK OVER-EXPRESSION OF CA 0.0
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene94345 SustainPine v3.0 2089
• AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 8.93328e-42
Putative N-terminus
sp_v3.0_unigene94831 SustainPine v3.0 455
• AutoFact: flowering locus D [Arabidopsis thaliana] 4.0e-09
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein LSD1-LIKE 1 3.168e-09
Internal
sp_v3.0_unigene95111 SustainPine v3.0 586
• AutoFact: Auxin:hydrogen symporter/transporter n=1 Tax=Zinnia violacea RepID=C0SU67_ZINEL 5.99756e-43
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 1.27518e-43
C-terminus
sp_v3.0_unigene95120 SustainPine v3.0 423
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S7A8_RICCO 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 5.192e-30
Internal
sp_v3.0_unigene95728 SustainPine v3.0 472
• AutoFact: Lipoxygenase n=2 Tax=Solanaceae RepID=Q43800_TOBAC 7.0e-38
• FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
• Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene95905 SustainPine v3.0 468
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 1.27e-17
Internal
sp_v3.0_unigene95984 SustainPine v3.0 503
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 5.118e-32
Internal
sp_v3.0_unigene96050 SustainPine v3.0 436
• AutoFact: PREDICTED: similar to haloacid dehalogenase-like hydrolase family protein n=1 Tax=Vitis vinifera RepID=UPI0001984399 0.0
• FL-Next: sp=Phospholipid-transporting ATPase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Aminophospholipid ATPase 5.547e-15
Internal
sp_v3.0_unigene96207 SustainPine v3.0 397
• AutoFact: protein kinase [Triticum aestivum] 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 5.602e-22
Internal
sp_v3.0_unigene96300 SustainPine v3.0 369
• AutoFact: Aminophospholipid ATPase n=1 Tax=Populus trichocarpa RepID=B9HLU4_POPTR 9.00054e-42
• FL-Next: sp=Phospholipid-transporting ATPase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Aminophospholipid ATPase 3.782e-15
Internal
sp_v3.0_unigene97697 SustainPine v3.0 144
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 2.244e-25
Internal
sp_v3.0_unigene98655 SustainPine v3.0 603
• AutoFact: HASTY [Arabidopsis thaliana] 0.0
• FL-Next: sp=Protein HASTY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain