Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: root development

Term: GO:0048364  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene125 SustainPine v3.0 1817
• AutoFact: Cation-transporting atpase, putative n=1 Tax=Ricinus communis RepID=B9R6Y5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endoplasmic reticulum [ER]-type calcium ATPase 3.276e-16
Complete
sp_v3.0_unigene295 SustainPine v3.0 3737
• AutoFact: Endoplasmic reticulum [ER]-type calcium ATPase n=3 Tax=rosids RepID=B9I912_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endoplasmic reticulum [ER]-type calcium ATPase 7.134e-20
Complete
sp_v3.0_unigene359 SustainPine v3.0 819
• AutoFact: ethylene-responsive transcription factor WRI1 [Arabidopsis thaliana] gb|AEE79213.1| ethylene-responsive transcription factor WRI1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene389 SustainPine v3.0 1440
• AutoFact: PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB 0.0
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 0.0
N-terminus
sp_v3.0_unigene405 SustainPine v3.0 641
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 1.0e-28
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 1.5e-17
N-terminus
sp_v3.0_unigene1080 SustainPine v3.0 1884
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 1 protein, putative 5.196e-19
Complete
sp_v3.0_unigene1094 SustainPine v3.0 3005
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 6.356e-15
Putative Complete
sp_v3.0_unigene1568 SustainPine v3.0 3619
• AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
• FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
• Sma3: Auxin response factor, putative 8.08829e-42
Complete
sp_v3.0_unigene1585 SustainPine v3.0 2855
• AutoFact: AP2 protein n=1 Tax=Elaeis guineensis RepID=A9JQY7_ELAGV 0.0
• FL-Next: sp=AP2-like ethylene-responsive transcription factor AIL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AP2 domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene1882 SustainPine v3.0 2560
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 2.322e-17
C-terminus
sp_v3.0_unigene2326 SustainPine v3.0 1690
• AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 2 of AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana GN=At2g41710 0.0
• Sma3: AP2 domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene2504 SustainPine v3.0 2351
• AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SWI/SNF transcription activation complex subunit 4.502e-14
Complete
sp_v3.0_unigene2547 SustainPine v3.0 2924
• AutoFact: GTP-binding protein alpha subunit, gna, putative n=1 Tax=Ricinus communis RepID=B9T5D0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GP-alpha-1 2.928e-17
Complete
sp_v3.0_unigene2716 SustainPine v3.0 4576
• AutoFact: Cysteine-type endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9RNQ1_RICCO 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 5.258e-13
Complete
sp_v3.0_unigene2756 SustainPine v3.0 3566
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9REF5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3232 SustainPine v3.0 1107
• AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein LSD1-LIKE 2 1.869e-08
C-terminus
sp_v3.0_unigene3259 SustainPine v3.0 1762
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.094e-39
C-terminus
sp_v3.0_unigene3380 SustainPine v3.0 4197
• AutoFact: Endoplasmic reticulum [ER]-type calcium ATPase n=2 Tax=Populus trichocarpa RepID=B9HPP7_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endoplasmic reticulum [ER]-type calcium ATPase 7.134e-20
Complete
sp_v3.0_unigene3780 SustainPine v3.0 2994
• AutoFact: homeodomain protein HOX3 [Gossypium hirsutum] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 7.562e-18
Complete
sp_v3.0_unigene4049 SustainPine v3.0 3369
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.094e-39
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain