Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Peptidase A2A, retrovirus RVP subgroup

Term: IPR018061  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene73692 SustainPine v3.0 427
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.005e-18
Internal
sp_v3.0_unigene74308 SustainPine v3.0 248
• AutoFact: rve domain containing protein 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 6.235e-07
Internal
sp_v3.0_unigene74378 SustainPine v3.0 457
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.661e-11
Internal
sp_v3.0_unigene74483 SustainPine v3.0 408
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 1.4013e-45
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.671e-14
Putative C-terminus
sp_v3.0_unigene75033 SustainPine v3.0 336
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.161e-34
Internal
sp_v3.0_unigene76201 SustainPine v3.0 439
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 1.855e-07
Internal
sp_v3.0_unigene76527 SustainPine v3.0 345
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.405e-24
Internal
sp_v3.0_unigene78958 SustainPine v3.0 395
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene81304 SustainPine v3.0 154
• AutoFact: putative copia-type polyprotein [Aster yellows phytoplasma] 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene93659 SustainPine v3.0 951
• AutoFact: rve domain containing protein 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.613e-20
Putative N-terminus
sp_v3.0_unigene93975 SustainPine v3.0 1962
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.023e-09
N-terminus
sp_v3.0_unigene95222 SustainPine v3.0 341
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.02e-13
Internal
sp_v3.0_unigene95317 SustainPine v3.0 560
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-39
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.504e-22
Putative N-terminus
sp_v3.0_unigene96237 SustainPine v3.0 654
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.953e-18
Internal
sp_v3.0_unigene98539 SustainPine v3.0 439
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.007e-14
Internal
sp_v3.0_unigene98669 SustainPine v3.0 406
• AutoFact: rve domain containing protein 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene98685 SustainPine v3.0 454
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.741e-24
Internal
sp_v3.0_unigene98919 SustainPine v3.0 375
• AutoFact: GK15001 n=1 Tax=Drosophila willistoni RepID=B4MVS9_DROWI 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.043e-07
Internal
sp_v3.0_unigene101848 SustainPine v3.0 552
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.622e-17
Internal
sp_v3.0_unigene102832 SustainPine v3.0 385
• AutoFact: Copia LTR rider n=1 Tax=Solanum lycopersicum RepID=B1N668_SOLLC 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.503e-23
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain