Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene87
|
SustainPine v3.0
|
1726
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.5e-17
|
|
Putative N-terminus
|
sp_v3.0_unigene681
|
SustainPine v3.0
|
1639
|
• AutoFact: RVT_2 domain containing protein
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.754e-19
|
|
C-terminus
|
sp_v3.0_unigene4667
|
SustainPine v3.0
|
319
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
6.0e-19
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.468e-31
|
|
Internal
|
sp_v3.0_unigene7772
|
SustainPine v3.0
|
1453
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.53e-17
|
|
C-terminus
|
sp_v3.0_unigene8836
|
SustainPine v3.0
|
3936
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.6e-31
|
|
Complete
|
sp_v3.0_unigene13239
|
SustainPine v3.0
|
815
|
• AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene15827
|
SustainPine v3.0
|
544
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.354e-14
|
|
Internal
|
sp_v3.0_unigene19666
|
SustainPine v3.0
|
435
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.651e-16
|
|
Internal
|
sp_v3.0_unigene19967
|
SustainPine v3.0
|
394
|
• AutoFact: Putative copia protein n=1 Tax=Oryza sativa Japonica Group RepID=Q84T44_ORYSJ
|
9.0e-23
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.794e-18
|
|
C-terminus
|
sp_v3.0_unigene21774
|
SustainPine v3.0
|
374
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
9.0e-39
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
Internal
|
sp_v3.0_unigene21882
|
SustainPine v3.0
|
536
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
9.00054e-42
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.704e-32
|
|
Internal
|
sp_v3.0_unigene22146
|
SustainPine v3.0
|
670
|
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.064e-38
|
|
Internal
|
sp_v3.0_unigene24118
|
SustainPine v3.0
|
721
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
8.0e-27
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.595e-07
|
|
Putative C-terminus
|
sp_v3.0_unigene32057
|
SustainPine v3.0
|
779
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.716e-24
|
|
Internal
|
sp_v3.0_unigene32796
|
SustainPine v3.0
|
283
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
7.0e-20
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.397e-12
|
|
Internal
|
sp_v3.0_unigene33049
|
SustainPine v3.0
|
854
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.447e-16
|
|
C-terminus
|
sp_v3.0_unigene33751
|
SustainPine v3.0
|
1131
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.24e-11
|
|
Putative C-terminus
|
sp_v3.0_unigene33950
|
SustainPine v3.0
|
1026
|
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.444e-26
|
|
Putative C-terminus
|
sp_v3.0_unigene33967
|
SustainPine v3.0
|
551
|
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH
|
9.99967e-42
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.52e-15
|
|
Putative C-terminus
|
sp_v3.0_unigene33986
|
SustainPine v3.0
|
865
|
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.606e-12
|
|
Putative C-terminus
|