|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene54771
|
SustainPine v3.0
|
335
|
|
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN
|
6.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.536e-20
|
|
Internal
|
|
sp_v3.0_unigene54856
|
SustainPine v3.0
|
482
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.176e-20
|
|
Internal
|
|
sp_v3.0_unigene55185
|
SustainPine v3.0
|
309
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
4.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.366e-20
|
|
Internal
|
|
sp_v3.0_unigene55267
|
SustainPine v3.0
|
477
|
|
• AutoFact: Putative copia-like retrotransposon Hopscotch polyprotein n=2 Tax=Zea mays RepID=Q8W0X9_MAIZE
|
2.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.202e-11
|
|
Putative N-terminus
|
|
sp_v3.0_unigene55433
|
SustainPine v3.0
|
416
|
|
• AutoFact: rve domain containing protein
|
1.0e-11
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.687e-06
|
|
Internal
|
|
sp_v3.0_unigene55480
|
SustainPine v3.0
|
505
|
|
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN
|
6.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.286e-08
|
|
Internal
|
|
sp_v3.0_unigene55519
|
SustainPine v3.0
|
283
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
3.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.69e-11
|
|
Internal
|
|
sp_v3.0_unigene55528
|
SustainPine v3.0
|
445
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
1.0e-34
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.469e-20
|
|
Internal
|
|
sp_v3.0_unigene55540
|
SustainPine v3.0
|
318
|
|
• AutoFact: pfam00665, rve, Integrase core domain
|
3.0e-14
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.377e-08
|
|
Internal
|
|
sp_v3.0_unigene55941
|
SustainPine v3.0
|
289
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH
|
2.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.267e-11
|
|
Putative N-terminus
|
|
sp_v3.0_unigene55965
|
SustainPine v3.0
|
436
|
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
4.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.433e-27
|
|
N-terminus
|
|
sp_v3.0_unigene56724
|
SustainPine v3.0
|
436
|
|
• AutoFact: RVT_2 domain containing protein
|
4.0e-10
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.623e-11
|
|
Internal
|
|
sp_v3.0_unigene56740
|
SustainPine v3.0
|
500
|
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.687e-35
|
|
N-terminus
|
|
sp_v3.0_unigene56743
|
SustainPine v3.0
|
188
|
|
• AutoFact: RVT_2 domain containing protein
|
7.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.038e-29
|
|
Internal
|
|
sp_v3.0_unigene56803
|
SustainPine v3.0
|
426
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
1.0e-37
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.146e-30
|
|
Internal
|
|
sp_v3.0_unigene56913
|
SustainPine v3.0
|
474
|
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.41e-27
|
|
N-terminus
|
|
sp_v3.0_unigene57322
|
SustainPine v3.0
|
251
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis RepID=E5SB91_TRISP
|
5.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.855e-10
|
|
Internal
|
|
sp_v3.0_unigene57379
|
SustainPine v3.0
|
360
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
2.0e-39
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.309e-12
|
|
Internal
|
|
sp_v3.0_unigene57409
|
SustainPine v3.0
|
458
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
1.0e-37
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.023e-16
|
|
Internal
|
|
sp_v3.0_unigene57500
|
SustainPine v3.0
|
438
|
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
2.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.752e-17
|
|
Putative C-terminus
|
