Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene52206
|
SustainPine v3.0
|
447
|
• AutoFact: RVT_2 domain containing protein
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.674e-18
|
|
Internal
|
sp_v3.0_unigene52244
|
SustainPine v3.0
|
446
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
2.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.45e-09
|
|
Putative N-terminus
|
sp_v3.0_unigene52276
|
SustainPine v3.0
|
435
|
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN
|
2.0e-38
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.411e-16
|
|
Internal
|
sp_v3.0_unigene52293
|
SustainPine v3.0
|
465
|
• AutoFact: Unassigned protein
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.638e-10
|
|
C-terminus
|
sp_v3.0_unigene52368
|
SustainPine v3.0
|
325
|
• AutoFact: Putative pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7G739_ORYSJ
|
9.0e-21
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.365e-10
|
|
Internal
|
sp_v3.0_unigene52405
|
SustainPine v3.0
|
357
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU
|
1.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.218e-30
|
|
Internal
|
sp_v3.0_unigene53026
|
SustainPine v3.0
|
470
|
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN
|
6.0e-35
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.153e-16
|
|
Internal
|
sp_v3.0_unigene53204
|
SustainPine v3.0
|
332
|
• AutoFact: Polyprotein-like n=1 Tax=Solanum chilense RepID=Q9AU17_SOLCI
|
4.0e-30
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.148e-11
|
|
Internal
|
sp_v3.0_unigene53298
|
SustainPine v3.0
|
515
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
2.0e-37
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.658e-16
|
|
Internal
|
sp_v3.0_unigene53512
|
SustainPine v3.0
|
238
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ
|
2.0e-26
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.433e-23
|
|
Internal
|
sp_v3.0_unigene53586
|
SustainPine v3.0
|
405
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
3.0e-24
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.115e-12
|
|
Internal
|
sp_v3.0_unigene53612
|
SustainPine v3.0
|
297
|
• AutoFact: Polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9AUZ1_ARATH
|
7.0e-23
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.503e-36
|
|
Internal
|
sp_v3.0_unigene53783
|
SustainPine v3.0
|
388
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
3.0e-25
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.86e-10
|
|
Internal
|
sp_v3.0_unigene53811
|
SustainPine v3.0
|
402
|
• AutoFact: Polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9FLA4_ARATH
|
2.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.97725e-43
|
|
Internal
|
sp_v3.0_unigene53814
|
SustainPine v3.0
|
350
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
1.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.363e-14
|
|
N-terminus
|
sp_v3.0_unigene53826
|
SustainPine v3.0
|
411
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE
|
8.0e-33
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
Internal
|
sp_v3.0_unigene54016
|
SustainPine v3.0
|
264
|
• AutoFact: rve domain containing protein
|
1.0e-08
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.386e-15
|
|
Internal
|
sp_v3.0_unigene54446
|
SustainPine v3.0
|
502
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis RepID=E5SB91_TRISP
|
9.99995e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.06377e-44
|
|
Internal
|
sp_v3.0_unigene54661
|
SustainPine v3.0
|
243
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
2.0e-19
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.285e-08
|
|
Internal
|
sp_v3.0_unigene54682
|
SustainPine v3.0
|
226
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
6.0e-20
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.359e-21
|
|
Internal
|