Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene35157
|
SustainPine v3.0
|
527
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
Internal
|
sp_v3.0_unigene35250
|
SustainPine v3.0
|
598
|
• AutoFact: Os07g0528100 protein (Fragment) n=3 Tax=Oryza sativa Japonica Group RepID=Q0D5X2_ORYSJ
|
6.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
Putative N-terminus
|
sp_v3.0_unigene36126
|
SustainPine v3.0
|
908
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.506e-37
|
|
N-terminus
|
sp_v3.0_unigene36228
|
SustainPine v3.0
|
547
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
8.0e-36
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.08e-14
|
|
Putative C-terminus
|
sp_v3.0_unigene36376
|
SustainPine v3.0
|
478
|
• AutoFact: similar to Copia protein (Gag-int-pol protein)
|
2.0e-26
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.283e-21
|
|
Internal
|
sp_v3.0_unigene38396
|
SustainPine v3.0
|
1514
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.619e-15
|
|
N-terminus
|
sp_v3.0_unigene38467
|
SustainPine v3.0
|
1215
|
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.80909e-45
|
|
N-terminus
|
sp_v3.0_unigene38587
|
SustainPine v3.0
|
1110
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.271e-19
|
|
C-terminus
|
sp_v3.0_unigene38619
|
SustainPine v3.0
|
1996
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.781e-12
|
|
C-terminus
|
sp_v3.0_unigene38696
|
SustainPine v3.0
|
2630
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.462e-08
|
|
Complete
|
sp_v3.0_unigene38724
|
SustainPine v3.0
|
2148
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.7e-24
|
|
C-terminus
|
sp_v3.0_unigene38725
|
SustainPine v3.0
|
496
|
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.496e-16
|
|
Internal
|
sp_v3.0_unigene38921
|
SustainPine v3.0
|
438
|
• AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR
|
3.00004e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.41917e-43
|
|
N-terminus
|
sp_v3.0_unigene39154
|
SustainPine v3.0
|
682
|
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH
|
9.94922e-44
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.932e-17
|
|
Internal
|
sp_v3.0_unigene40017
|
SustainPine v3.0
|
283
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
1.0e-23
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.234e-36
|
|
Internal
|
sp_v3.0_unigene40605
|
SustainPine v3.0
|
995
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.142e-18
|
|
Putative C-terminus
|
sp_v3.0_unigene40943
|
SustainPine v3.0
|
564
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.658e-33
|
|
Internal
|
sp_v3.0_unigene42288
|
SustainPine v3.0
|
1694
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.022e-14
|
|
Putative N-terminus
|
sp_v3.0_unigene42290
|
SustainPine v3.0
|
2773
|
• AutoFact: rve domain containing protein
|
1.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.331e-16
|
|
Putative Complete
|
sp_v3.0_unigene42652
|
SustainPine v3.0
|
351
|
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME
|
1.0e-25
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.475e-19
|
|
Internal
|