Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9837 SustainPine v3.0 1155
AutoFact: 3-ketoacyl CoA thiolase 2 n=1 Tax=Petunia x hybrida RepID=C8YNG7_PETHY 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-ketoacyl-CoA thiolase 1.262e-11
C-terminus
sp_v3.0_unigene9916 SustainPine v3.0 2463
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pre-mRNA-splicing factor prp45 3.622e-09
Complete
sp_v3.0_unigene9994 SustainPine v3.0 1398
AutoFact: F-box family protein n=2 Tax=Populus trichocarpa RepID=B9IES2_POPTR 2.0e-31
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Sma3: F-box family protein 2.011e-39
N-terminus
sp_v3.0_unigene9996 SustainPine v3.0 2280
AutoFact: Importin subunit alpha-1 [Arabidopsis thaliana] ref|NP_850524.1| Importin subunit alpha-1 [Arabidopsis thaliana] sp|Q96321.2|IMA1_ARATH RecName: Full=Importin subunit alpha-1; AltName: Full=Karyopherin subunit alpha-1; Short=KAP-alpha-1 gb|AAC27644.1| imp 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Importin alpha, putative 5.68e-22
Complete
sp_v3.0_unigene10011 SustainPine v3.0 607
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RI95_RICCO 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.032e-39
C-terminus
sp_v3.0_unigene10022 SustainPine v3.0 2336
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Suppressor of K+ transport growth defect-like protein 3.584e-07
Complete
sp_v3.0_unigene10098 SustainPine v3.0 2582
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene10203 SustainPine v3.0 817
AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 7.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene10320 SustainPine v3.0 1381
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA and export factor binding protein, putative 3.345e-16
Complete
sp_v3.0_unigene10387 SustainPine v3.0 785
AutoFact: FK506-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R9N7_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 5.796e-21
C-terminus
sp_v3.0_unigene10421 SustainPine v3.0 756
AutoFact: Ribosomal protein S7 n=3 Tax=Cucujiformia RepID=D1M806_9CUCU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S7 4.647e-26
Putative Complete
sp_v3.0_unigene10474 SustainPine v3.0 326
AutoFact: H/ACA ribonucleoprotein complex subunit 1-like protein 1 n=5 Tax=Andropogoneae RepID=B6TFJ5_MAIZE 5.0e-32
FL-Next: sp=Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 1-like protein 1 9.017e-09
Internal
sp_v3.0_unigene10510 SustainPine v3.0 1458
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA and export factor binding protein, putative 3.345e-16
Complete
sp_v3.0_unigene10634 SustainPine v3.0 2512
AutoFact: Phosphoenolpyruvate carboxykinase [ATP], putative n=1 Tax=Ricinus communis RepID=B9R6Q4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoenolpyruvate carboxykinase 3.006e-28
Complete
sp_v3.0_unigene10676 SustainPine v3.0 1723
AutoFact: U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] emb|CAC01842.1| putative protein [Arabidopsis thaliana] gb|AED92337.1| U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene10939 SustainPine v3.0 765
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 7.465e-36
C-terminus
sp_v3.0_unigene11073 SustainPine v3.0 2611
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Pescadillo-like protein 7.107e-14
Complete
sp_v3.0_unigene11093 SustainPine v3.0 1333
AutoFact: Arginine/serine-rich splicing factor, putative n=1 Tax=Ricinus communis RepID=B9SAR0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Arginine/serine-rich splicing factor, putative 1.249e-13
Complete
sp_v3.0_unigene11388 SustainPine v3.0 941
AutoFact: serine/threonine protein kinase [Aster tripolium] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 1.521e-28
C-terminus
sp_v3.0_unigene11397 SustainPine v3.0 929
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain