Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8026 SustainPine v3.0 1154
AutoFact: alpha-crystallin domain of heat shock protein-containing protein [Arabidopsis thaliana] gb|AAO22777.1| unknown protein [Arabidopsis thaliana] gb|AAO42405.1| unknown protein [Arabidopsis thaliana] gb|AEE33156.1| alpha-crystallin domain of heat shock protei 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Sma3: Heat shock protein-like protein 1.902e-08
C-terminus
sp_v3.0_unigene8039 SustainPine v3.0 2448
AutoFact: putative protein kinase APK1A [Trifolium pratense] 0.0
FL-Next: sp=Protein kinase APK1B, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 4.522e-38
Complete
sp_v3.0_unigene8055 SustainPine v3.0 1984
AutoFact: 3-ketoacyl CoA thiolase 2 n=1 Tax=Petunia x hybrida RepID=C8YNG7_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-ketoacyl-CoA thiolase 6.332e-16
Complete
sp_v3.0_unigene8139 SustainPine v3.0 1485
AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 5.0e-30
FL-Next: sp=Small nuclear ribonucleoprotein-associated protein; Vitis vinifera (Grape). 0.0
Sma3: Putative snRNP protein 7.054e-09
Complete
sp_v3.0_unigene8279 SustainPine v3.0 2746
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.8e-18
Complete
sp_v3.0_unigene8282 SustainPine v3.0 1479
AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 7.0e-29
FL-Next: sp=Formin-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Formin-like protein 1 1.032e-08
C-terminus
sp_v3.0_unigene8358 SustainPine v3.0 1672
AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Formin-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin binding protein, putative 1.521e-09
C-terminus
sp_v3.0_unigene8364 SustainPine v3.0 1488
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Argonaute protein group 4.374e-14
N-terminus
sp_v3.0_unigene8377 SustainPine v3.0 1442
AutoFact: U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] emb|CAC01842.1| putative protein [Arabidopsis thaliana] gb|AED92337.1| U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene8441 SustainPine v3.0 1789
AutoFact: protein kinase APK1B [Arabidopsis thaliana] gb|AEC08191.1| protein kinase APK1B [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein kinase APK1B, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 8.85e-35
Complete
sp_v3.0_unigene8467 SustainPine v3.0 2839
AutoFact: homolog of nucleolar protein NOP56 [Arabidopsis thaliana] gb|AAF02835.1|AC009894_6 nucleolar protein [Arabidopsis thaliana] gb|AAG40838.1|AF302492_1 NOP56-like protein [Arabidopsis thaliana] gb|AAK62596.1| At1g56110/T6H22_9 [Arabidopsis thaliana] gb|AAM26 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleolar protein 1.728e-10
Complete
sp_v3.0_unigene8484 SustainPine v3.0 2772
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 4.268e-22
N-terminus
sp_v3.0_unigene8594 SustainPine v3.0 1335
AutoFact: Viroid symptom modulation protein n=2 Tax=Solanum RepID=Q9M728_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 3.605e-28
C-terminus
sp_v3.0_unigene8605 SustainPine v3.0 1120
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene8848 SustainPine v3.0 769
AutoFact: Serine/threonine-protein phosphatase n=9 Tax=rosids RepID=B9I5N0_POPTR 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
C-terminus
sp_v3.0_unigene9270 SustainPine v3.0 1616
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Putative Complete
sp_v3.0_unigene9335 SustainPine v3.0 1680
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAD30630.1|AC006085_3 Similar to protein kinases [Arabidopsis thaliana] gb|AAG50535.1|AC079828_6 serine/threonine protein kinase, putative [Arabidopsis thaliana] dbj|BAF01247.1| putative s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 1.292e-32
Complete
sp_v3.0_unigene9349 SustainPine v3.0 1239
AutoFact: Rac-like GTP-binding protein 3 n=4 Tax=BEP clade RepID=RAC3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.79e-17
Complete
sp_v3.0_unigene9640 SustainPine v3.0 742
AutoFact: Protein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9T8J0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene9710 SustainPine v3.0 631
AutoFact: formin homology 2 domain-containing protein 5 [Arabidopsis thaliana] gb|AAT37554.1| formin homology 2 domain-containing protein 5 [Arabidopsis thaliana] 2.0e-29
FL-Next: sp=Formin-like protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Formin-like protein 1 2.689e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain