Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1581 SustainPine v3.0 2070
AutoFact: protein kinase family protein [Arabidopsis thaliana] sp|Q8GXZ3.1|Y5102_ARATH RecName: Full=Serine/threonine-protein kinase At5g01020 dbj|BAC42590.1| putative protein kinase [Arabidopsis thaliana] gb|AED90288.1| protein kinase family protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 1.649e-28
Putative Complete
sp_v3.0_unigene1598 SustainPine v3.0 3315
AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 1.168e-21
Complete
sp_v3.0_unigene1639 SustainPine v3.0 3214
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: C2H2 zinc-finger protein SERRATE 3.983e-09
Complete
sp_v3.0_unigene1768 SustainPine v3.0 1443
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=D5A9W9_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene1878 SustainPine v3.0 1134
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 0.0
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Sma3: Pre-mRNA-splicing factor prp45 2.076e-09
Putative Complete
sp_v3.0_unigene1884 SustainPine v3.0 2761
AutoFact: Heat shock 70 kDa protein, mitochondrial n=3 Tax=rosids RepID=HSP7M_PHAVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
Complete
sp_v3.0_unigene1900 SustainPine v3.0 1096
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z5_MALDO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.677e-25
Putative C-terminus
sp_v3.0_unigene1943 SustainPine v3.0 2051
AutoFact: MAR-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar protein nop56, putative 1.106e-11
N-terminus
sp_v3.0_unigene2027 SustainPine v3.0 3915
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene2150 SustainPine v3.0 493
AutoFact: Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana] sp|Q9LG26.2|PARN_ARATH RecName: Full=Poly(A)-specific ribonuclease PARN; AltName: Full=Polyadenylate-specific ribonuclease; Short=AtPARN; AltName: Full=Protein ABA hypersensitive germination 2 dbj| 1.0e-31
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene2172 SustainPine v3.0 1527
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.624e-08
Complete
sp_v3.0_unigene2183 SustainPine v3.0 903
AutoFact: heat shock protein HSP81-1 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene2231 SustainPine v3.0 1613
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosomal protein 6.743e-09
Complete
sp_v3.0_unigene2272 SustainPine v3.0 1125
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z9_MALDO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.535e-33
N-terminus
sp_v3.0_unigene2341 SustainPine v3.0 459
AutoFact: AAA ATPase, central region; L-lactate dehydrogenase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 2.38e-13
Internal
sp_v3.0_unigene2354 SustainPine v3.0 4198
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene2391 SustainPine v3.0 2584
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 7.893e-21
Complete
sp_v3.0_unigene2493 SustainPine v3.0 1993
AutoFact: pfam07717, OB_NTP_bind, Oligonucleotide/oligosaccharide-binding (OB)-fold 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.482e-18
Putative Complete
sp_v3.0_unigene2530 SustainPine v3.0 1864
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z9_MALDO 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 9.81e-18
Complete
sp_v3.0_unigene2579 SustainPine v3.0 2564
AutoFact: U3 small nucleolar ribonucleoprotein protein mpp10, putative n=1 Tax=Ricinus communis RepID=B9RB06_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain