Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene209307 SustainPine v3.0 435
• AutoFact: Ribosomal protein L24 n=3 Tax=Perkinsus RepID=A7YXM0_PERCH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
Putative Complete
sp_v3.0_unigene209310 SustainPine v3.0 600
• AutoFact: L35 n=1 Tax=Suberites domuncula RepID=Q4KTF0_SUBDO 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 1.67e-18
Complete
sp_v3.0_unigene209318 SustainPine v3.0 479
• AutoFact: 60S ribosomal protein l27a n=2 Tax=Ictalurus punctatus RepID=E3TEN4_ICTPU 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 8.674e-16
Complete
sp_v3.0_unigene209320 SustainPine v3.0 362
• AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 1.00053e-42
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
N-terminus
sp_v3.0_unigene209325 SustainPine v3.0 579
• AutoFact: Ribosomal protein L12e n=1 Tax=Timarcha balearica RepID=Q4GXJ1_TIMBA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene209330 SustainPine v3.0 677
• AutoFact: 40S ribosomal protein S8 (Fragment) n=1 Tax=Latrodectus hesperus RepID=E7D1D5_9ARAC 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
Complete
sp_v3.0_unigene209335 SustainPine v3.0 763
• AutoFact: 78 kDa glucose-regulated protein precursor [Neurospora crassa OR74A] sp|P78695.3|GRP78_NEUCR RecName: Full=78 kDa glucose-regulated protein homolog; Short=GRP-78; AltName: Full=Immunoglobulin heavy chain-binding protein homolog; Short=BiP; Flags: Precurso 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene209336 SustainPine v3.0 574
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.598e-23
Complete
sp_v3.0_unigene209353 SustainPine v3.0 294
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene209467 SustainPine v3.0 287
• AutoFact: 40S ribosomal protein S16 n=22 Tax=Embryophyta RepID=RS16_GOSHI 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 2.195e-25
N-terminus
sp_v3.0_unigene209519 SustainPine v3.0 626
• AutoFact: 60S ribosomal protein L25 n=2 Tax=Metarhizium RepID=E9DWA0_METAQ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Putative Complete
sp_v3.0_unigene209554 SustainPine v3.0 723
• AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 4.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene209573 SustainPine v3.0 655
• AutoFact: Histone domain containing protein 2.0e-14
• Sma3: Histone H2A 0.0
coding
sp_v3.0_unigene209578 SustainPine v3.0 473
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene209619 SustainPine v3.0 241
• AutoFact: PREDICTED: similar to 40S ribosomal protein S3a (V-fos transformation effector protein) isoform 11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2EC6 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 2.74e-17
N-terminus
sp_v3.0_unigene209756 SustainPine v3.0 194
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 6.0e-11
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene209836 SustainPine v3.0 385
• AutoFact: 60S ribosomal protein L34-1 n=28 Tax=Magnoliophyta RepID=RL341_ARATH 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L34 2.611e-12
Putative N-terminus
sp_v3.0_unigene209889 SustainPine v3.0 384
• AutoFact: Serine/threonine-protein kinase AtPK7 n=3 Tax=Arabidopsis RepID=KPK7_ARATH 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 1.405e-13
N-terminus
sp_v3.0_unigene210232 SustainPine v3.0 299
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 4.504e-15
Internal
sp_v3.0_unigene210244 SustainPine v3.0 503
• AutoFact: Heat shock protein 90-1 n=9 Tax=rosids RepID=HS901_ARATH 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain