Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene205433 SustainPine v3.0 256
AutoFact: 60S ribosomal protein L8-3 [Arabidopsis thaliana] sp|Q42064.2|RL83_ARATH RecName: Full=60S ribosomal protein L8-3 gb|AAK32778.1|AF361610_1 AT4g36130/F23E13_20 [Arabidopsis thaliana] gb|AAK32922.1|AF367335_1 AT4g36130/F23E13_20 [Arabidopsis thaliana] emb|C 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene205437 SustainPine v3.0 473
AutoFact: 40S ribosomal protein S23 n=5 Tax=Chromadorea RepID=RS23_BRUMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene205438 SustainPine v3.0 516
AutoFact: 60S ribosomal protein L23 n=3 Tax=Oomycetes RepID=D0MUG8_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23 1.151e-10
Complete
sp_v3.0_unigene205453 SustainPine v3.0 490
AutoFact: Rho GTPase n=1 Tax=Polysphondylium pallidum RepID=D3AW29_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 1.842e-17
N-terminus
sp_v3.0_unigene205454 SustainPine v3.0 449
AutoFact: Elongation factor 1-alpha n=1 Tax=Brachionus plicatilis RepID=C6L868_BRAPC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene205464 SustainPine v3.0 489
AutoFact: Prohibitin-1, mitochondrial n=1 Tax=Dictyostelium discoideum RepID=PHB1_DICDI 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Prohibitin 2.596e-38
N-terminus
sp_v3.0_unigene205485 SustainPine v3.0 383
AutoFact: RacA [Epichloe festucae] dbj|BAF79591.1| small GTPase [Epichloe festucae] 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.195e-17
N-terminus
sp_v3.0_unigene205501 SustainPine v3.0 565
AutoFact: Protein mago nashi n=7 Tax=Magnoliophyta RepID=B6ST87_MAIZE 0.0
FL-Next: tr=Mago nashi; Taiwania cryptomerioides. 0.0
Sma3: Mago nashi-like protein 8.093e-21
Putative Complete
sp_v3.0_unigene205509 SustainPine v3.0 406
AutoFact: 40S ribosomal protein S4 [Bombyx mori] sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4 gb|AAV34860.1| ribosomal protein S4 [Bombyx mori] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.955e-24
Internal
sp_v3.0_unigene205516 SustainPine v3.0 515
AutoFact: 40S ribosomal protein S24 n=1 Tax=Polysphondylium pallidum RepID=D3BM86_POLPA 4.0e-31
FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene205528 SustainPine v3.0 423
AutoFact: [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DnaJ protein 5.624e-14
Internal
sp_v3.0_unigene205538 SustainPine v3.0 362
AutoFact: Putative 60S ribosomal protein L9 n=1 Tax=Spadella cephaloptera RepID=A8E672_9BILA 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 3.818e-18
C-terminus
sp_v3.0_unigene205540 SustainPine v3.0 497
AutoFact: Ribosomal protein L13A, putative n=1 Tax=Ixodes scapularis RepID=B7PR90_IXOSC 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 5.541e-21
C-terminus
sp_v3.0_unigene205541 SustainPine v3.0 466
AutoFact: Putative 60S ribosomal protein RPL11 n=1 Tax=Phoronis muelleri RepID=B2YI33_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L11 2.963e-11
Putative C-terminus
sp_v3.0_unigene205542 SustainPine v3.0 529
AutoFact: Ribosomal protein rps13 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CD41_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.325e-14
Putative Complete
sp_v3.0_unigene205556 SustainPine v3.0 444
AutoFact: 40S ribosomal protein S16 n=22 Tax=Embryophyta RepID=RS16_GOSHI 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S16 1.955e-36
Putative Complete
sp_v3.0_unigene205572 SustainPine v3.0 505
AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.449e-09
Complete
sp_v3.0_unigene205574 SustainPine v3.0 506
AutoFact: 60S ribosomal protein L27a n=3 Tax=sordariomyceta RepID=A6S7S5_BOTFB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.39e-12
Complete
sp_v3.0_unigene205578 SustainPine v3.0 463
AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene205579 SustainPine v3.0 526
AutoFact: PREDICTED: similar to 60S ribosomal protein L27a n=1 Tax=Hydra magnipapillata RepID=UPI0001923E6C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.39e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain